Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Gm4799-201ENSMUST00000095396 657 ntBASIC20.6■□□□□ 0.89
Gm3543D3Z235 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gm3543D3Z235 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3543D3Z235 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3543D3Z235 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gm3543D3Z235 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gm3543D3Z235 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Gm3543D3Z235 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Gm3543D3Z235 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3543D3Z235 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.58■□□□□ 0.89
Gm3543D3Z235 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gm3543D3Z235 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gm3543D3Z235 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Gm3543D3Z235 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.58■□□□□ 0.89
Gm3543D3Z235 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Gm3543D3Z235 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3543D3Z235 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.57■□□□□ 0.88
Gm3543D3Z235 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gm3543D3Z235 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Gm3543D3Z235 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3543D3Z235 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Gm3543D3Z235 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3543D3Z235 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3543D3Z235 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3543D3Z235 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.54■□□□□ 0.88
Gm3543D3Z235 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.54■□□□□ 0.88
Gm3543D3Z235 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm3543D3Z235 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3543D3Z235 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3543D3Z235 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3543D3Z235 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm3543D3Z235 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3543D3Z235 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3543D3Z235 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm3543D3Z235 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3543D3Z235 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Gm3543D3Z235 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3543D3Z235 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm3543D3Z235 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3543D3Z235 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3543D3Z235 Mir6538-201ENSMUST00000183713 110 ntBASIC20.51■□□□□ 0.87
Gm3543D3Z235 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3543D3Z235 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3543D3Z235 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.5■□□□□ 0.87
Gm3543D3Z235 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm3543D3Z235 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Gm3543D3Z235 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3543D3Z235 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.49■□□□□ 0.87
Gm3543D3Z235 Mir3960-201ENSMUST00000198213 73 ntBASIC20.49■□□□□ 0.87
Gm3543D3Z235 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3543D3Z235 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3543D3Z235 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3543D3Z235 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3543D3Z235 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.45■□□□□ 0.86
Gm3543D3Z235 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.45■□□□□ 0.86
Gm3543D3Z235 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3543D3Z235 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.45■□□□□ 0.86
Gm3543D3Z235 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3543D3Z235 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3543D3Z235 Gm11175-201ENSMUST00000116172 543 ntBASIC20.44■□□□□ 0.86
Gm3543D3Z235 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3543D3Z235 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3543D3Z235 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3543D3Z235 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.43■□□□□ 0.86
Gm3543D3Z235 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gm3543D3Z235 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3543D3Z235 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3543D3Z235 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3543D3Z235 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3543D3Z235 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3543D3Z235 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3543D3Z235 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.41■□□□□ 0.86
Gm3543D3Z235 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.41■□□□□ 0.86
Gm3543D3Z235 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms