Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ptchd4B9EKX1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ptchd4B9EKX1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.14■■□□□ 1.61
Ptchd4B9EKX1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
Ptchd4B9EKX1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptchd4B9EKX1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Ptchd4B9EKX1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ptchd4B9EKX1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.13■■□□□ 1.61
Ptchd4B9EKX1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ptchd4B9EKX1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptchd4B9EKX1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ptchd4B9EKX1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ptchd4B9EKX1 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.11■■□□□ 1.61
Ptchd4B9EKX1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.11■■□□□ 1.61
Ptchd4B9EKX1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ptchd4B9EKX1 Gm7332-201ENSMUST00000118351 454 ntBASIC25.1■■□□□ 1.61
Ptchd4B9EKX1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptchd4B9EKX1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ptchd4B9EKX1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.09■■□□□ 1.61
Ptchd4B9EKX1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ptchd4B9EKX1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ptchd4B9EKX1 Gm14523-201ENSMUST00000117260 558 ntBASIC25.08■■□□□ 1.61
Ptchd4B9EKX1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25.08■■□□□ 1.61
Ptchd4B9EKX1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ptchd4B9EKX1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ptchd4B9EKX1 AC151971.4-201ENSMUST00000214717 704 ntBASIC25.07■■□□□ 1.6
Ptchd4B9EKX1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.06■■□□□ 1.6
Ptchd4B9EKX1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ptchd4B9EKX1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ptchd4B9EKX1 Terc-201ENSMUST00000082862 423 ntBASIC25.05■■□□□ 1.6
Ptchd4B9EKX1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Ptchd4B9EKX1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ptchd4B9EKX1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Ptchd4B9EKX1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ptchd4B9EKX1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ptchd4B9EKX1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptchd4B9EKX1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Ptchd4B9EKX1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ptchd4B9EKX1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ptchd4B9EKX1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptchd4B9EKX1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Ptchd4B9EKX1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ptchd4B9EKX1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.99■■□□□ 1.59
Ptchd4B9EKX1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ptchd4B9EKX1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.99■■□□□ 1.59
Ptchd4B9EKX1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ptchd4B9EKX1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.98■■□□□ 1.59
Ptchd4B9EKX1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ptchd4B9EKX1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ptchd4B9EKX1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Ptchd4B9EKX1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.97■■□□□ 1.59
Ptchd4B9EKX1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC24.97■■□□□ 1.59
Ptchd4B9EKX1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ptchd4B9EKX1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptchd4B9EKX1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ptchd4B9EKX1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.96■■□□□ 1.59
Ptchd4B9EKX1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Ptchd4B9EKX1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Ptchd4B9EKX1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ptchd4B9EKX1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptchd4B9EKX1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
Ptchd4B9EKX1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptchd4B9EKX1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ptchd4B9EKX1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ptchd4B9EKX1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ptchd4B9EKX1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ptchd4B9EKX1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ptchd4B9EKX1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.9■■□□□ 1.58
Ptchd4B9EKX1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.9■■□□□ 1.58
Ptchd4B9EKX1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ptchd4B9EKX1 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.88■■□□□ 1.57
Ptchd4B9EKX1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ptchd4B9EKX1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
Ptchd4B9EKX1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.87■■□□□ 1.57
Ptchd4B9EKX1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.87■■□□□ 1.57
Ptchd4B9EKX1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ptchd4B9EKX1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ptchd4B9EKX1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ptchd4B9EKX1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ptchd4B9EKX1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptchd4B9EKX1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.85■■□□□ 1.57
Ptchd4B9EKX1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptchd4B9EKX1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ptchd4B9EKX1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms