Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Gm45364-201ENSMUST00000210883 159 ntBASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sh2d4bA6X942 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
Sh2d4bA6X942 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Sh2d4bA6X942 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.47■■□□□ 1.51
Sh2d4bA6X942 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Sh2d4bA6X942 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sh2d4bA6X942 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh2d4bA6X942 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Sh2d4bA6X942 Gm14523-201ENSMUST00000117260 558 ntBASIC24.42■■□□□ 1.5
Sh2d4bA6X942 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sh2d4bA6X942 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Sh2d4bA6X942 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sh2d4bA6X942 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Sh2d4bA6X942 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Sh2d4bA6X942 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.39■■□□□ 1.49
Sh2d4bA6X942 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Sh2d4bA6X942 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sh2d4bA6X942 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Sh2d4bA6X942 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.38■■□□□ 1.49
Sh2d4bA6X942 Gm22567-201ENSMUST00000175542 342 ntBASIC24.37■■□□□ 1.49
Sh2d4bA6X942 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.37■■□□□ 1.49
Sh2d4bA6X942 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh2d4bA6X942 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.36■■□□□ 1.49
Sh2d4bA6X942 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sh2d4bA6X942 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Sh2d4bA6X942 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.35■■□□□ 1.49
Sh2d4bA6X942 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh2d4bA6X942 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sh2d4bA6X942 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.34■■□□□ 1.49
Sh2d4bA6X942 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.34■■□□□ 1.49
Sh2d4bA6X942 Gm5812-201ENSMUST00000061073 957 ntBASIC24.34■■□□□ 1.49
Sh2d4bA6X942 Gm37136-201ENSMUST00000194368 194 ntBASIC24.33■■□□□ 1.49
Sh2d4bA6X942 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh2d4bA6X942 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sh2d4bA6X942 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sh2d4bA6X942 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sh2d4bA6X942 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sh2d4bA6X942 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.31■■□□□ 1.48
Sh2d4bA6X942 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sh2d4bA6X942 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Sh2d4bA6X942 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sh2d4bA6X942 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Sh2d4bA6X942 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Sh2d4bA6X942 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sh2d4bA6X942 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC24.29■■□□□ 1.48
Sh2d4bA6X942 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Sh2d4bA6X942 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
Sh2d4bA6X942 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sh2d4bA6X942 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sh2d4bA6X942 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.28■■□□□ 1.48
Sh2d4bA6X942 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Sh2d4bA6X942 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sh2d4bA6X942 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Sh2d4bA6X942 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh2d4bA6X942 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Sh2d4bA6X942 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Sh2d4bA6X942 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.24■■□□□ 1.47
Sh2d4bA6X942 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.24■■□□□ 1.47
Sh2d4bA6X942 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sh2d4bA6X942 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Sh2d4bA6X942 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Gm5921-201ENSMUST00000075898 882 ntBASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Sh2d4bA6X942 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.21■■□□□ 1.47
Sh2d4bA6X942 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Sh2d4bA6X942 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Sh2d4bA6X942 Gm10420-201ENSMUST00000121713 882 ntBASIC24.2■■□□□ 1.46
Sh2d4bA6X942 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sh2d4bA6X942 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Sh2d4bA6X942 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Sh2d4bA6X942 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms