Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a4A2AX52 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Col6a4A2AX52 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col6a4A2AX52 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a4A2AX52 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col6a4A2AX52 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Col6a4A2AX52 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Col6a4A2AX52 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.61■□□□□ 0.73
Col6a4A2AX52 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.61■□□□□ 0.73
Col6a4A2AX52 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col6a4A2AX52 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a4A2AX52 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.59■□□□□ 0.73
Col6a4A2AX52 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a4A2AX52 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Col6a4A2AX52 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a4A2AX52 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a4A2AX52 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Col6a4A2AX52 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.57■□□□□ 0.72
Col6a4A2AX52 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a4A2AX52 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.55■□□□□ 0.72
Col6a4A2AX52 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a4A2AX52 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a4A2AX52 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col6a4A2AX52 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a4A2AX52 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a4A2AX52 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Col6a4A2AX52 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.52■□□□□ 0.72
Col6a4A2AX52 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a4A2AX52 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a4A2AX52 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a4A2AX52 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.52■□□□□ 0.71
Col6a4A2AX52 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a4A2AX52 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a4A2AX52 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Col6a4A2AX52 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a4A2AX52 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.51■□□□□ 0.71
Col6a4A2AX52 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a4A2AX52 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.5■□□□□ 0.71
Col6a4A2AX52 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a4A2AX52 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a4A2AX52 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a4A2AX52 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a4A2AX52 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.48■□□□□ 0.71
Col6a4A2AX52 Gm14117-201ENSMUST00000122417 843 ntBASIC19.47■□□□□ 0.71
Col6a4A2AX52 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a4A2AX52 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a4A2AX52 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Col6a4A2AX52 Terc-201ENSMUST00000082862 423 ntBASIC19.46■□□□□ 0.71
Col6a4A2AX52 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Col6a4A2AX52 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a4A2AX52 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a4A2AX52 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a4A2AX52 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a4A2AX52 Rps24-207ENSMUST00000224568 714 ntBASIC19.45■□□□□ 0.7
Col6a4A2AX52 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Gm45102-201ENSMUST00000207427 857 ntBASIC19.44■□□□□ 0.7
Col6a4A2AX52 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a4A2AX52 Gm13238-201ENSMUST00000117655 780 ntBASIC19.43■□□□□ 0.7
Col6a4A2AX52 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a4A2AX52 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a4A2AX52 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a4A2AX52 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.41■□□□□ 0.7
Col6a4A2AX52 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a4A2AX52 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a4A2AX52 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Col6a4A2AX52 Gm43566-201ENSMUST00000196851 808 ntBASIC19.4■□□□□ 0.7
Col6a4A2AX52 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a4A2AX52 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a4A2AX52 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a4A2AX52 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Col6a4A2AX52 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Col6a4A2AX52 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Col6a4A2AX52 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Col6a4A2AX52 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 228.1 ms