Protein–RNA interactions for Protein: A1L3P4

Slc9a6, Sodium/hydrogen exchanger, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a6A1L3P4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.46■■□□□ 1.03
Slc9a6A1L3P4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Slc9a6A1L3P4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a6A1L3P4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a6A1L3P4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Slc9a6A1L3P4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Slc9a6A1L3P4 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Slc9a6A1L3P4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a6A1L3P4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a6A1L3P4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a6A1L3P4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Slc9a6A1L3P4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Slc9a6A1L3P4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a6A1L3P4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Slc9a6A1L3P4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Slc9a6A1L3P4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc9a6A1L3P4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc9a6A1L3P4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.37■■□□□ 1.01
Slc9a6A1L3P4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Slc9a6A1L3P4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a6A1L3P4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a6A1L3P4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc9a6A1L3P4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a6A1L3P4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a6A1L3P4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc9a6A1L3P4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a6A1L3P4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Slc9a6A1L3P4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc9a6A1L3P4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc9a6A1L3P4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.33■■□□□ 1.01
Slc9a6A1L3P4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.33■■□□□ 1
Slc9a6A1L3P4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc9a6A1L3P4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Slc9a6A1L3P4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc9a6A1L3P4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc9a6A1L3P4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc9a6A1L3P4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Slc9a6A1L3P4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc9a6A1L3P4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.31■■□□□ 1
Slc9a6A1L3P4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc9a6A1L3P4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc9a6A1L3P4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.31■■□□□ 1
Slc9a6A1L3P4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Slc9a6A1L3P4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.29■■□□□ 1
Slc9a6A1L3P4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Slc9a6A1L3P4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc9a6A1L3P4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Slc9a6A1L3P4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Slc9a6A1L3P4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.27■■□□□ 1
Slc9a6A1L3P4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.27■■□□□ 1
Slc9a6A1L3P4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Slc9a6A1L3P4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Slc9a6A1L3P4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Slc9a6A1L3P4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.26■□□□□ 0.99
Slc9a6A1L3P4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc9a6A1L3P4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms