Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim17A0A504 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smim17A0A504 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.85■□□□□ 0.93
Smim17A0A504 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.84■□□□□ 0.93
Smim17A0A504 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smim17A0A504 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smim17A0A504 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Smim17A0A504 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smim17A0A504 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Smim17A0A504 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Smim17A0A504 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smim17A0A504 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smim17A0A504 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.81■□□□□ 0.92
Smim17A0A504 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smim17A0A504 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Smim17A0A504 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smim17A0A504 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smim17A0A504 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.8■□□□□ 0.92
Smim17A0A504 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smim17A0A504 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Smim17A0A504 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smim17A0A504 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim17A0A504 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smim17A0A504 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smim17A0A504 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smim17A0A504 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smim17A0A504 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smim17A0A504 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Smim17A0A504 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.77■□□□□ 0.92
Smim17A0A504 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smim17A0A504 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smim17A0A504 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smim17A0A504 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim17A0A504 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.76■□□□□ 0.91
Smim17A0A504 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smim17A0A504 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smim17A0A504 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.76■□□□□ 0.91
Smim17A0A504 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smim17A0A504 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smim17A0A504 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smim17A0A504 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smim17A0A504 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smim17A0A504 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim17A0A504 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim17A0A504 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim17A0A504 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim17A0A504 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Smim17A0A504 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smim17A0A504 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smim17A0A504 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smim17A0A504 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smim17A0A504 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smim17A0A504 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Smim17A0A504 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smim17A0A504 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smim17A0A504 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smim17A0A504 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smim17A0A504 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.72■□□□□ 0.91
Smim17A0A504 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smim17A0A504 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
Smim17A0A504 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smim17A0A504 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Smim17A0A504 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim17A0A504 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smim17A0A504 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smim17A0A504 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.7■□□□□ 0.9
Smim17A0A504 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smim17A0A504 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smim17A0A504 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.69■□□□□ 0.9
Smim17A0A504 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smim17A0A504 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smim17A0A504 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smim17A0A504 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim17A0A504 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim17A0A504 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smim17A0A504 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.67■□□□□ 0.9
Smim17A0A504 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smim17A0A504 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim17A0A504 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim17A0A504 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smim17A0A504 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smim17A0A504 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms