Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Igkv3-4A0A140T8Q4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Igkv3-4A0A140T8Q4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Igkv3-4A0A140T8Q4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Igkv3-4A0A140T8Q4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Igkv3-4A0A140T8Q4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Igkv3-4A0A140T8Q4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Igkv3-4A0A140T8Q4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv3-4A0A140T8Q4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv3-4A0A140T8Q4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Igkv3-4A0A140T8Q4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Igkv3-4A0A140T8Q4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Igkv3-4A0A140T8Q4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Igkv3-4A0A140T8Q4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Igkv3-4A0A140T8Q4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-4A0A140T8Q4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-4A0A140T8Q4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-4A0A140T8Q4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Igkv3-4A0A140T8Q4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Igkv3-4A0A140T8Q4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Igkv3-4A0A140T8Q4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms