Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trav13n-4A0A0G2JG01 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13n-4A0A0G2JG01 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13n-4A0A0G2JG01 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav13n-4A0A0G2JG01 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13n-4A0A0G2JG01 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav13n-4A0A0G2JG01 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav13n-4A0A0G2JG01 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav13n-4A0A0G2JG01 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.38■□□□□ 0.53
Trav13n-4A0A0G2JG01 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trav13n-4A0A0G2JG01 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13n-4A0A0G2JG01 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13n-4A0A0G2JG01 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13n-4A0A0G2JG01 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
Trav13n-4A0A0G2JG01 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav13n-4A0A0G2JG01 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav13n-4A0A0G2JG01 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trav13n-4A0A0G2JG01 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trav13n-4A0A0G2JG01 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trav13n-4A0A0G2JG01 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.33■□□□□ 0.52
Trav13n-4A0A0G2JG01 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Particl-201ENSMUST00000205370 1560 ntBASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav13n-4A0A0G2JG01 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trav13n-4A0A0G2JG01 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav13n-4A0A0G2JG01 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trav13n-4A0A0G2JG01 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Gm30023-201ENSMUST00000197970 889 ntBASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cap2-205ENSMUST00000225824 1634 ntBASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav13n-4A0A0G2JG01 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav13n-4A0A0G2JG01 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13n-4A0A0G2JG01 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav13n-4A0A0G2JG01 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.27■□□□□ 0.52
Trav13n-4A0A0G2JG01 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.27■□□□□ 0.52
Trav13n-4A0A0G2JG01 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.27■□□□□ 0.51
Trav13n-4A0A0G2JG01 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav13n-4A0A0G2JG01 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms