Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Gm9806-201ENSMUST00000051080 552 ntBASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.33■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tcrg-V3A0A0G2JEW2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Gm16437-201ENSMUST00000025669 507 ntBASIC22.31■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Gm11687-201ENSMUST00000118911 886 ntBASIC22.3■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.28■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.27■■□□□ 1.16
Tcrg-V3A0A0G2JEW2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.25■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.24■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Tcrg-V3A0A0G2JEW2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Terc-201ENSMUST00000082862 423 ntBASIC22.2■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.19■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.19■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.18■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Tcrg-V3A0A0G2JEW2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tcrg-V3A0A0G2JEW2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tcrg-V3A0A0G2JEW2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tcrg-V3A0A0G2JEW2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Tcrg-V3A0A0G2JEW2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Tcrg-V3A0A0G2JEW2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.13■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms