Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Trbv26A0A0B4J1P5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trbv26A0A0B4J1P5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv26A0A0B4J1P5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.01■□□□□ 0.63
Trbv26A0A0B4J1P5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Trbv26A0A0B4J1P5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv26A0A0B4J1P5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv26A0A0B4J1P5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv26A0A0B4J1P5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv26A0A0B4J1P5 Gm6311-201ENSMUST00000073790 878 ntBASIC18.99■□□□□ 0.63
Trbv26A0A0B4J1P5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv26A0A0B4J1P5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trbv26A0A0B4J1P5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 Mir3960-201ENSMUST00000198213 73 ntBASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trbv26A0A0B4J1P5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.97■□□□□ 0.63
Trbv26A0A0B4J1P5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.96■□□□□ 0.63
Trbv26A0A0B4J1P5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv26A0A0B4J1P5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv26A0A0B4J1P5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv26A0A0B4J1P5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv26A0A0B4J1P5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv26A0A0B4J1P5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv26A0A0B4J1P5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.95■□□□□ 0.62
Trbv26A0A0B4J1P5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv26A0A0B4J1P5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Trbv26A0A0B4J1P5 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.94■□□□□ 0.62
Trbv26A0A0B4J1P5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv26A0A0B4J1P5 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.94■□□□□ 0.62
Trbv26A0A0B4J1P5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbv26A0A0B4J1P5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv26A0A0B4J1P5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.92■□□□□ 0.62
Trbv26A0A0B4J1P5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Trbv26A0A0B4J1P5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbv26A0A0B4J1P5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Trbv26A0A0B4J1P5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv26A0A0B4J1P5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trbv26A0A0B4J1P5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv26A0A0B4J1P5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trbv26A0A0B4J1P5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Trbv26A0A0B4J1P5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv26A0A0B4J1P5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv26A0A0B4J1P5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv26A0A0B4J1P5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.89■□□□□ 0.61
Trbv26A0A0B4J1P5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Trbv26A0A0B4J1P5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv26A0A0B4J1P5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv26A0A0B4J1P5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv26A0A0B4J1P5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Trbv26A0A0B4J1P5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Trbv26A0A0B4J1P5 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.88■□□□□ 0.61
Trbv26A0A0B4J1P5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv26A0A0B4J1P5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv26A0A0B4J1P5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv26A0A0B4J1P5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbv26A0A0B4J1P5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Gm45364-201ENSMUST00000210883 159 ntBASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv26A0A0B4J1P5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv26A0A0B4J1P5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.85■□□□□ 0.61
Trbv26A0A0B4J1P5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trbv26A0A0B4J1P5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv26A0A0B4J1P5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trbv26A0A0B4J1P5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Trbv26A0A0B4J1P5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv26A0A0B4J1P5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv26A0A0B4J1P5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv26A0A0B4J1P5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trbv26A0A0B4J1P5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv26A0A0B4J1P5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv26A0A0B4J1P5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv26A0A0B4J1P5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms