Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trav21-dv12A0A075B6C4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav21-dv12A0A075B6C4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav21-dv12A0A075B6C4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav21-dv12A0A075B6C4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav21-dv12A0A075B6C4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav21-dv12A0A075B6C4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav21-dv12A0A075B6C4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.54■□□□□ 0.4
Trav21-dv12A0A075B6C4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav21-dv12A0A075B6C4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Trav21-dv12A0A075B6C4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav21-dv12A0A075B6C4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.53■□□□□ 0.4
Trav21-dv12A0A075B6C4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav21-dv12A0A075B6C4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav21-dv12A0A075B6C4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav21-dv12A0A075B6C4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav21-dv12A0A075B6C4 Gm6821-201ENSMUST00000107540 542 ntBASIC17.52■□□□□ 0.4
Trav21-dv12A0A075B6C4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav21-dv12A0A075B6C4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav21-dv12A0A075B6C4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav21-dv12A0A075B6C4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav21-dv12A0A075B6C4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav21-dv12A0A075B6C4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav21-dv12A0A075B6C4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav21-dv12A0A075B6C4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav21-dv12A0A075B6C4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav21-dv12A0A075B6C4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav21-dv12A0A075B6C4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav21-dv12A0A075B6C4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav21-dv12A0A075B6C4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav21-dv12A0A075B6C4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav21-dv12A0A075B6C4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav21-dv12A0A075B6C4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav21-dv12A0A075B6C4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav21-dv12A0A075B6C4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
Trav21-dv12A0A075B6C4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav21-dv12A0A075B6C4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav21-dv12A0A075B6C4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav21-dv12A0A075B6C4 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav21-dv12A0A075B6C4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trav21-dv12A0A075B6C4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav21-dv12A0A075B6C4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav21-dv12A0A075B6C4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.46■□□□□ 0.39
Trav21-dv12A0A075B6C4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav21-dv12A0A075B6C4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav21-dv12A0A075B6C4 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav21-dv12A0A075B6C4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav21-dv12A0A075B6C4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav21-dv12A0A075B6C4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav21-dv12A0A075B6C4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Trav21-dv12A0A075B6C4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav21-dv12A0A075B6C4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav21-dv12A0A075B6C4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav21-dv12A0A075B6C4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav21-dv12A0A075B6C4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav21-dv12A0A075B6C4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav21-dv12A0A075B6C4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav21-dv12A0A075B6C4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav21-dv12A0A075B6C4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav21-dv12A0A075B6C4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav21-dv12A0A075B6C4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav21-dv12A0A075B6C4 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav21-dv12A0A075B6C4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav21-dv12A0A075B6C4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav21-dv12A0A075B6C4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav21-dv12A0A075B6C4 Gm37136-201ENSMUST00000194368 194 ntBASIC17.37■□□□□ 0.37
Trav21-dv12A0A075B6C4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav21-dv12A0A075B6C4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav21-dv12A0A075B6C4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trav21-dv12A0A075B6C4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav21-dv12A0A075B6C4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms