Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6d-7A0A075B6B0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6d-7A0A075B6B0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-7A0A075B6B0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-7A0A075B6B0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Trav6d-7A0A075B6B0 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6d-7A0A075B6B0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav6d-7A0A075B6B0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-7A0A075B6B0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trav6d-7A0A075B6B0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-7A0A075B6B0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav6d-7A0A075B6B0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-7A0A075B6B0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.55■□□□□ 0.4
Trav6d-7A0A075B6B0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-7A0A075B6B0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-7A0A075B6B0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trav6d-7A0A075B6B0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav6d-7A0A075B6B0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav6d-7A0A075B6B0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-7A0A075B6B0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav6d-7A0A075B6B0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-7A0A075B6B0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav6d-7A0A075B6B0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav6d-7A0A075B6B0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.52■□□□□ 0.39
Trav6d-7A0A075B6B0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav6d-7A0A075B6B0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav6d-7A0A075B6B0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav6d-7A0A075B6B0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-7A0A075B6B0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-7A0A075B6B0 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-7A0A075B6B0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav6d-7A0A075B6B0 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Gm11599-201ENSMUST00000118720 878 ntBASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6d-7A0A075B6B0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6d-7A0A075B6B0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-7A0A075B6B0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trav6d-7A0A075B6B0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6d-7A0A075B6B0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6d-7A0A075B6B0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6d-7A0A075B6B0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6d-7A0A075B6B0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms