Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm30023-201ENSMUST00000197970 889 ntBASIC18.2■□□□□ 0.5
Trav17A0A075B655 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav17A0A075B655 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav17A0A075B655 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav17A0A075B655 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav17A0A075B655 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav17A0A075B655 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav17A0A075B655 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.18■□□□□ 0.5
Trav17A0A075B655 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav17A0A075B655 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav17A0A075B655 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav17A0A075B655 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Trav17A0A075B655 Zfp131-205ENSMUST00000223812 663 ntBASIC18.17■□□□□ 0.5
Trav17A0A075B655 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav17A0A075B655 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav17A0A075B655 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav17A0A075B655 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trav17A0A075B655 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.16■□□□□ 0.5
Trav17A0A075B655 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Trav17A0A075B655 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav17A0A075B655 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Trav17A0A075B655 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.15■□□□□ 0.5
Trav17A0A075B655 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav17A0A075B655 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav17A0A075B655 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav17A0A075B655 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav17A0A075B655 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav17A0A075B655 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav17A0A075B655 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.13■□□□□ 0.49
Trav17A0A075B655 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav17A0A075B655 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav17A0A075B655 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav17A0A075B655 Gm24970-201ENSMUST00000175582 82 ntBASIC18.12■□□□□ 0.49
Trav17A0A075B655 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Trav17A0A075B655 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav17A0A075B655 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav17A0A075B655 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav17A0A075B655 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav17A0A075B655 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav17A0A075B655 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trav17A0A075B655 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.1■□□□□ 0.49
Trav17A0A075B655 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav17A0A075B655 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav17A0A075B655 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Gm9397-201ENSMUST00000200125 605 ntBASIC18.09■□□□□ 0.49
Trav17A0A075B655 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav17A0A075B655 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.09■□□□□ 0.49
Trav17A0A075B655 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Trav17A0A075B655 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav17A0A075B655 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trav17A0A075B655 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Trav17A0A075B655 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav17A0A075B655 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav17A0A075B655 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav17A0A075B655 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav17A0A075B655 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav17A0A075B655 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav17A0A075B655 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav17A0A075B655 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav17A0A075B655 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav17A0A075B655 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav17A0A075B655 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav17A0A075B655 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav17A0A075B655 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav17A0A075B655 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav17A0A075B655 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trav17A0A075B655 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.04■□□□□ 0.48
Trav17A0A075B655 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav17A0A075B655 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav17A0A075B655 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.03■□□□□ 0.48
Trav17A0A075B655 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav17A0A075B655 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav17A0A075B655 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav17A0A075B655 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav17A0A075B655 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.02■□□□□ 0.48
Trav17A0A075B655 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav17A0A075B655 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Trav17A0A075B655 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav17A0A075B655 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trav17A0A075B655 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav17A0A075B655 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav17A0A075B655 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav17A0A075B655 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18■□□□□ 0.47
Trav17A0A075B655 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms