Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3-4A0A075B654 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav3-4A0A075B654 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trav3-4A0A075B654 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav3-4A0A075B654 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav3-4A0A075B654 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3-4A0A075B654 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav3-4A0A075B654 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav3-4A0A075B654 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trav3-4A0A075B654 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav3-4A0A075B654 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav3-4A0A075B654 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav3-4A0A075B654 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3-4A0A075B654 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3-4A0A075B654 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav3-4A0A075B654 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav3-4A0A075B654 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav3-4A0A075B654 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav3-4A0A075B654 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.37■□□□□ 0.05
Trav3-4A0A075B654 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav3-4A0A075B654 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav3-4A0A075B654 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav3-4A0A075B654 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav3-4A0A075B654 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav3-4A0A075B654 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav3-4A0A075B654 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Trav3-4A0A075B654 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav3-4A0A075B654 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3-4A0A075B654 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3-4A0A075B654 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav3-4A0A075B654 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3-4A0A075B654 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3-4A0A075B654 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3-4A0A075B654 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav3-4A0A075B654 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trav3-4A0A075B654 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3-4A0A075B654 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-4A0A075B654 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3-4A0A075B654 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav3-4A0A075B654 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3-4A0A075B654 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms