Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-55A0A075B5W6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Ighv1-55A0A075B5W6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-55A0A075B5W6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-55A0A075B5W6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-55A0A075B5W6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-55A0A075B5W6 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.13■□□□□ 0.49
Ighv1-55A0A075B5W6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-55A0A075B5W6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-55A0A075B5W6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-55A0A075B5W6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-55A0A075B5W6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ighv1-55A0A075B5W6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-55A0A075B5W6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-55A0A075B5W6 Gm4799-201ENSMUST00000095396 657 ntBASIC18.07■□□□□ 0.48
Ighv1-55A0A075B5W6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-55A0A075B5W6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-55A0A075B5W6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ighv1-55A0A075B5W6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-55A0A075B5W6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-55A0A075B5W6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.03■□□□□ 0.48
Ighv1-55A0A075B5W6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-55A0A075B5W6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-55A0A075B5W6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-55A0A075B5W6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-55A0A075B5W6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ighv1-55A0A075B5W6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-55A0A075B5W6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.02■□□□□ 0.48
Ighv1-55A0A075B5W6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-55A0A075B5W6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-55A0A075B5W6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ighv1-55A0A075B5W6 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.02■□□□□ 0.47
Ighv1-55A0A075B5W6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-55A0A075B5W6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ighv1-55A0A075B5W6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-55A0A075B5W6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ighv1-55A0A075B5W6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-55A0A075B5W6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ighv1-55A0A075B5W6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18■□□□□ 0.47
Ighv1-55A0A075B5W6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-55A0A075B5W6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-55A0A075B5W6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-55A0A075B5W6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-55A0A075B5W6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-55A0A075B5W6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-55A0A075B5W6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-55A0A075B5W6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 Mir3960-201ENSMUST00000198213 73 ntBASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-55A0A075B5W6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ighv1-55A0A075B5W6 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.95■□□□□ 0.46
Ighv1-55A0A075B5W6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-55A0A075B5W6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-55A0A075B5W6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-55A0A075B5W6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-55A0A075B5W6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-55A0A075B5W6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms