RNA–Protein interactions for RNA: ENST00000626257.2
Retrieved 4 of 4 RNA–protein pairs in 4 ms
CCZ1B-215, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, human
TSL 2 BASIC
Gene CCZ1B, Length 2,211 nt, Biotype protein coding, Subcellular localisation Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
CCZ1B-215 | ENST00000626257 | SF3B1 | O75533 | 1304 aa | Known RBP eCLIP | 27.11 | ■■□□□ 1.93 | 8e-6 | ■■■■■ 107 |
CCZ1B-215 | ENST00000626257 | PRPF8 | Q6P2Q9 | 2335 aa | Known RBP eCLIP | 19.92 | ■□□□□ 0.78 | 2e-11 | ■■■■■ 43 |
CCZ1B-215 | ENST00000626257 | KHSRP | Q92945 | 711 aa | Known RBP eCLIP | 27.45 | ■■□□□ 1.98 | 6e-12 | ■■■■□ 20.1 |
CCZ1B-215 | ENST00000626257 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 24.28 | ■■□□□ 1.48 | 1e-6 | ■■■□□ 17.6 |