RNA–Protein interactions for RNA: ENST00000402271.5

HDAC11-203, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-203ENST00000402271 RHBDD2Q6NTF9 364 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 VRK3Q8IV63 474 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 ZBTB2Q8N680 514 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 C17orf62Q9BQA9 187 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 MENTQ9BUN1 341 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 CATSPERZQ9NTU4 200 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 PLAGL1Q9UM63 463 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 DRG1Q9Y295 367 aaKnown RBP18.68■□□□□ 0.58
HDAC11-203ENST00000402271 PADI2Q9Y2J8 665 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 SEC16AO15027 2179 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 MED13Q9UHV7 2174 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 COL12A1Q99715 3063 aa18.68■□□□□ 0.58
HDAC11-203ENST00000402271 PTPN13Q12923 2485 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 NBASA2RRP1 2371 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 ISM1B1AKI9 464 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 RPN2P04844 631 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 ZSCAN5DPP0CG00 497 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 TTPAP49638 278 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 CSE1LP55060 971 aaKnown RBP18.67■□□□□ 0.58
HDAC11-203ENST00000402271 MLLT10P55197 1068 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 HSPA14Q0VDF9 509 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 DEFB110Q30KQ9 67 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 C4orf22Q6V702 233 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 ZNF662Q6ZS27 426 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 MED25Q71SY5 747 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 DNAJC22Q8N4W6 341 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 TMEM102Q8N9M5 508 aaPredicted RBP18.67■□□□□ 0.58
HDAC11-203ENST00000402271 PROKR1Q8TCW9 393 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 LKAAEAR1Q8TD35 194 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 GBP5Q96PP8 586 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 SPRTNQ9H040 489 aaPredicted RBP18.67■□□□□ 0.58
HDAC11-203ENST00000402271 CHRAC1Q9NRG0 131 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 TREX1Q9NSU2 369 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 MARCH4Q9P2E8 410 aaPredicted RBP18.67■□□□□ 0.58
HDAC11-203ENST00000402271 ANAPC5Q9UJX4 755 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 ZKSCAN5Q9Y2L8 839 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 FER1L5A0AVI2 2057 aa18.67■□□□□ 0.58
HDAC11-203ENST00000402271 CYSRT1A8MQ03 144 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 PRMT5O14744 637 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-203ENST00000402271 ZSCAN9O15535 394 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-203ENST00000402271 KLF7O75840 302 aaPredicted RBP18.66■□□□□ 0.58
HDAC11-203ENST00000402271 SLCO2B1O94956 709 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 APOA4P06727 396 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 CBSLP0DN79 551 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 AOAHP28039 575 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 CBSP35520 551 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 GRB7Q14451 532 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 TLDC1Q6P9B6 456 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 UNC5DQ6UXZ4 953 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 ATCAYQ86WG3 371 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 RAB43Q86YS6 212 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 DCUN1D3Q8IWE4 304 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 LINC01555Q8NAE3 123 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 IL22Q9GZX6 179 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 SRPK3Q9UPE1 567 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 PLCL2Q9UPR0 1127 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 PCSK5Q92824 1860 aa18.66■□□□□ 0.58
HDAC11-203ENST00000402271 SNRNP200O75643 2136 aaKnown RBP18.65■□□□□ 0.58
HDAC11-203ENST00000402271 IQCF5A8MTL0 148 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 AP3B1O00203 1094 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 CD3EAPO15446 510 aaKnown RBP18.65■□□□□ 0.58
HDAC11-203ENST00000402271 CTSBP07858 339 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 CD63P08962 238 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 CD9P21926 228 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 RRADP55042 308 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 SESN2P58004 480 aaPredicted RBP18.65■□□□□ 0.58
HDAC11-203ENST00000402271 LDB1Q86U70 411 aaPredicted RBP18.65■□□□□ 0.58
HDAC11-203ENST00000402271 HPS6Q86YV9 775 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 MPP5Q8N3R9 675 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 FDCSPQ8NFU4 85 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 SLC22A18Q96BI1 424 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 IP6K3Q96PC2 410 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 P2RY12Q9H244 342 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 ZNF451Q9Y4E5 1061 aa18.65■□□□□ 0.58
HDAC11-203ENST00000402271 NPY2RP49146 381 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 DCDP81605 110 aaKnown RBP18.64■□□□□ 0.57
HDAC11-203ENST00000402271 SRSF1Q07955 248 aaKnown RBP eCLIP18.64■□□□□ 0.57
HDAC11-203ENST00000402271 ATP1A4Q13733 1029 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 SSPNQ14714 243 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 TMED2Q15363 201 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 NADK2Q4G0N4 442 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 MLIPQ5VWP3 458 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 KRT222Q8N1A0 295 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 ZNF655Q8N720 491 aaPredicted RBP18.64■□□□□ 0.57
HDAC11-203ENST00000402271 MAIP1Q8WWC4 291 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 PANX3Q96QZ0 392 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 ANKMY1Q9P2S6 941 aa18.64■□□□□ 0.57
HDAC11-203ENST00000402271 G3BP2Q9UN86 482 aaKnown RBP18.64■□□□□ 0.57
HDAC11-203ENST00000402271 TTLL8A6PVC2 850 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 SORBS2O94875 1100 aaKnown RBP18.63■□□□□ 0.57
HDAC11-203ENST00000402271 S1PR4O95977 384 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 MAGP20916 626 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 RPS3P23396 243 aaKnown RBP eCLIP18.63■□□□□ 0.57
HDAC11-203ENST00000402271 GCGRP47871 477 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 CRADDP78560 199 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 BASP1P80723 227 aaKnown RBP18.63■□□□□ 0.57
HDAC11-203ENST00000402271 C1orf189Q5VU69 101 aa18.63■□□□□ 0.57
HDAC11-203ENST00000402271 PTRHD1Q6GMV3 140 aaKnown RBP18.63■□□□□ 0.57
HDAC11-203ENST00000402271 MRPL14Q6P1L8 145 aaKnown RBP18.63■□□□□ 0.57
HDAC11-203ENST00000402271 MRGPREQ86SM8 312 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms