RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 SOCS2O14508 198 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PER2O15055 1255 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 SNAP29O95721 258 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TGFB1P01137 390 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 OCM2P0CE71 109 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 OCMP0CE72 109 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 MANFP55145 182 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 FAM219BQ5XKK7 198 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PGM2L1Q6PCE3 622 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 HIPK1Q86Z02 1210 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CD200R1Q8TD46 325 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DPF3Q92784 378 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 GATA6Q92908 595 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 RHBGQ9H310 441 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 H3BNX3 289 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 AGRPO00253 132 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CLIC1O00299 241 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 OPN1SWP03999 348 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 RPN2P04844 631 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 FABP3P05413 133 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 ALDOCP09972 364 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 SLC35G4P0C7Q5 338 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DBTP11182 482 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 BPIP17213 487 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 HOXD9P28356 352 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 SGSHP51688 502 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TOP3AQ13472 1001 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TUBB3Q13509 450 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PHKG1Q16816 387 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 RFX4Q33E94 735 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PDCD4Q53EL6 469 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DEPDC1Q5TB30 811 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 ANXA8L1Q5VT79 327 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 KANK2Q63ZY3 851 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 MED27Q6P2C8 311 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CASP12Q6UXS9 341 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 C17orf64Q86WR6 236 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 ADGRG2Q8IZP9 1017 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 C1orf52Q8N6N3 182 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 LEMD2Q8NC56 503 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 ZNF483Q8TF39 744 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 UBE2E3Q969T4 207 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 NACC2Q96BF6 587 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 EPS8L2Q9H6S3 715 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CMTM6Q9NX76 183 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 IFT80Q9P2H3 777 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DNAJB9Q9UBS3 223 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CFAP20Q9Y6A4 193 aaKnown RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TRBV23OR9-2A0A075B6M9 112 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TMEM189-UBE2V1I3L0A0 370 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 B4GALT3O60512 393 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PCCBP05166 539 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CLTBP09497 229 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 HLA-EP13747 358 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 IL7RP16871 459 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 GK3PQ14409 553 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 NR1D2Q14995 579 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 ATP13A5Q4VNC0 1218 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 TRIM40Q6P9F5 258 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DEF8Q6ZN54 512 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 LARP4Q71RC2 724 aaKnown RBP eCLIP8.27□□□□□ -1.099e-6■■□□□ 12.1
PTPRK-206ENST00000368215 FAM124AQ86V42 546 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 VANGL1Q8TAA9 524 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 FERD3LQ96RJ6 166 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 DUSP26Q9BV47 211 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 EPB41L1Q9H4G0 881 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 CCM2LQ9NUG4 571 aaPredicted RBP8.27□□□□□ -1.09
PTPRK-206ENST00000368215 IL17CQ9P0M4 197 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 VPS29Q9UBQ0 182 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PDE10AQ9Y233 779 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
PTPRK-206ENST00000368215 SHROOM3Q8TF72 1996 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 KLKB1P03952 638 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ASLP04424 464 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ENGP17813 658 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ETV3P41162 512 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CDKL1Q00532 357 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 FOXM1Q08050 763 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 DGUOKQ16854 277 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 HSF5Q4G112 596 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 TYW3Q6IPR3 259 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 AHSA2Q719I0 299 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PIK3C3Q8NEB9 887 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MYLIPQ8WY64 445 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 OVCA2Q8WZ82 227 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PAWRQ96IZ0 340 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 UBXN10Q96LJ8 280 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ATOH8Q96SQ7 321 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 MTG2Q9H4K7 406 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PLGRKTQ9HBL7 147 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 FARSBQ9NSD9 589 aaKnown RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 CARNS1A5YM72 827 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 RFPL2O75678 378 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-206ENST00000368215 EBLN1P0CF75 366 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 NR2F1P10589 423 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 GPX3P22352 226 aa8.26□□□□□ -1.09
PTPRK-206ENST00000368215 PCYT1AP49585 367 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms