RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 PRKCQQ04759 706 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 RIPK1Q13546 671 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 PTK2BQ14289 1009 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 MAPRE2Q15555 327 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 ZRSR2Q15696 482 aaKnown RBP17.66■□□□□ 0.42
VIM-201ENST00000224237 CCSMST1Q4G0I0 132 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 AGTRAPQ6RW13 159 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 FAM83HQ6ZRV2 1179 aaPredicted RBP17.66■□□□□ 0.42
VIM-201ENST00000224237 SPATA19Q7Z5L4 167 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 PDZD3Q86UT5 571 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 SNX32Q86XE0 403 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 KLHDC8AQ8IYD2 350 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 SYNPOQ8N3V7 929 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 OR2T34Q8NGX1 318 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 HMGB4Q8WW32 186 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 PKP4Q99569 1192 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 APOOQ9BUR5 198 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 SLC29A3Q9BZD2 475 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 SGK2Q9HBY8 427 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 FZD3Q9NPG1 666 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 C2orf42Q9NWW7 574 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 ZNHIT2Q9UHR6 403 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 SLC17A4Q9Y2C5 497 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 RNF11Q9Y3C5 154 aa17.66■□□□□ 0.42
VIM-201ENST00000224237 PSMD12O00232 456 aaPredicted RBP17.65■□□□□ 0.42
VIM-201ENST00000224237 SLC16A8O95907 504 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 IMPA1P29218 277 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 CPOXP36551 454 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 HTR6P50406 440 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 DGKEP52429 567 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 FASTKQ14296 549 aaKnown RBP17.65■□□□□ 0.42
VIM-201ENST00000224237 GRB7Q14451 532 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 GSTA3Q16772 222 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 KIF19Q2TAC6 998 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 METRNLQ641Q3 311 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 SCIMPQ6UWF3 145 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 MYLK4Q86YV6 388 aaPredicted RBP17.65■□□□□ 0.42
VIM-201ENST00000224237 OR2T11Q8NH01 316 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 MYOCQ99972 504 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 SLC23A2Q9UGH3 650 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 IDO1P14902 403 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ITPKAP23677 461 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ACADVLP49748 655 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 DMPKQ09013 629 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 CUL3Q13618 768 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 LRRC32Q14392 662 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ATP6AP1LQ52LC2 224 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 GPR153Q6NV75 609 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 SYT13Q7L8C5 426 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ZNF687Q8N1G0 1237 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 OR56A3Q8NH54 315 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ZDHHC5Q9C0B5 715 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 ITM2CQ9NQX7 267 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 USP36Q9P275 1121 aaKnown RBP17.65■□□□□ 0.42
VIM-201ENST00000224237 KLQ9UEF7 1012 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 GIMAP2Q9UG22 337 aa17.65■□□□□ 0.42
VIM-201ENST00000224237 KRBA1A5PL33 1030 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 CHURC1-FNTBB4DL54 471 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 UGDHO60701 494 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 PEX11AO75192 247 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 ULK1O75385 1050 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 HOXC4P09017 264 aaPredicted RBP17.64■□□□□ 0.41
VIM-201ENST00000224237 ERVK-8P63133 956 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 NAE1Q13564 534 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 ABRAXAS2Q15018 415 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 SNCBQ16143 134 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 Q6ZSR9 355 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 THOC6Q86W42 341 aaKnown RBP17.64■□□□□ 0.41
VIM-201ENST00000224237 L3MBTL4Q8NA19 623 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 OR9A1PQ8NGU1 263 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 MED8Q96G25 268 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 TIMM29Q9BSF4 260 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 TM7SF3Q9NS93 570 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 CCDC167Q9P0B6 97 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 ASF1AQ9Y294 204 aa17.64■□□□□ 0.41
VIM-201ENST00000224237 IFRD1O00458 451 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 FFAR3O14843 346 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 GPR42O15529 346 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 KCNJ13O60928 360 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 KRT6AP02538 564 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 KRT6BP04259 564 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 CEACAM5P06731 702 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 PGM1P36871 562 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 KRT6CP48668 564 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 SLC25A3Q00325 362 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 HABP4Q5JVS0 413 aaKnown RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 CHST15Q7LFX5 561 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 PGBD3Q8N328 593 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 MIER2Q8N344 545 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 HMGCLL1Q8TB92 370 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 USP7Q93009 1102 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 UHRF1Q96T88 793 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 SDR39U1Q9NRG7 319 aaPredicted RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 INTS7Q9NVH2 962 aaKnown RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 ACSL5Q9ULC5 683 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 MRPS17Q9Y2R5 130 aaKnown RBP17.63■□□□□ 0.41
VIM-201ENST00000224237 SLC28A1O00337 649 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 FPGTO14772 594 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 RGS14O43566 566 aa17.63■□□□□ 0.41
VIM-201ENST00000224237 IGLV3-19P01714 112 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms