RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C1orf87Q8N0U7 546 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 GBGT1Q8N5D6 347 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 RIT1Q92963 219 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 PHF21AQ96BD5 680 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 CENPTQ96BT3 561 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 MTBPQ96DY7 904 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 C3orf30Q96M34 536 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 DCLK3Q9C098 648 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 RBM38Q9H0Z9 239 aaKnown RBP4.87□□□□□ -1.63
LINC00397-202ENST00000606785 DNAJC4Q9NNZ3 241 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 TRPC4Q9UBN4 977 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 INSL5Q9Y5Q6 135 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 ACEP12821 1306 aa4.87□□□□□ -1.63
LINC00397-202ENST00000606785 HYKKA2RU49 373 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 LILRA5A6NI73 299 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PPFIA2O75334 1257 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 GH1P01241 217 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 INHBAP08476 426 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 LBPP18428 481 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SCP2P22307 547 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PTGER4P35408 488 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 HSD17B3P37058 310 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TMPOP42166 694 aaKnown RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SSR1P43307 286 aaKnown RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PSMC4P43686 418 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 NT5C2P49902 561 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 NME5P56597 212 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 Q0VFX4 171 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SLC39A14Q15043 492 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM35AQ53FP2 167 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SYT14P1Q58G82 188 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 XKR9Q5GH70 373 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PXDC1Q5TGL8 231 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 NRARPQ7Z6K4 114 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PHLDB2Q86SQ0 1253 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 COMMD2Q86X83 199 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 NBPF5PQ86XG9 351 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 FOXP4Q8IVH2 680 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SIAH3Q8IW03 269 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 CNTN4Q8IWV2 1026 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 RNF113BQ8IZP6 322 aaKnown RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 PPFIBP2Q8ND30 876 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 VANGL1Q8TAA9 524 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TANKQ92844 425 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SNRNP40Q96DI7 357 aaKnown RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TBC1D31Q96DN5 1066 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM237Q96Q45 408 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TNMDQ9H2S6 317 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 TCP11L1Q9NUJ3 509 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 FBXL5Q9UKA1 691 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 APPL1Q9UKG1 709 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 STX8Q9UNK0 236 aa4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SPIN1Q9Y657 262 aaPredicted RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
LINC00397-202ENST00000606785 A0A1W2PPW3 197 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MED19A0JLT2 244 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 LINC01553A4QN01 128 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MID1O15344 667 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PPIP5K2O43314 1243 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 CLDN14O95500 239 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 WDPCPO95876 746 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM191BP0C7N4 346 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MYL6BP14649 208 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MYOD1P15172 320 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 POLR2CP19387 275 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PSMB4P28070 264 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 CCND3P30281 292 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MTCP1P56278 107 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 MAT1AQ00266 395 aaKnown RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 DSC1Q08554 894 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF155Q12901 538 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PRKAA1Q13131 559 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF234Q14588 700 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PPA1Q15181 289 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 HFEQ30201 348 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 IQCCQ4KMZ1 466 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TAF3Q5VWG9 929 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TRNP1Q6NT89 227 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 LINGO4Q6UY18 593 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ARHGAP22Q7Z5H3 698 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 RABEPKQ7Z6M1 372 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TMPRSS12Q86WS5 348 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ARHGAP24Q8N264 748 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PGBD5Q8N414 524 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 SFRP1Q8N474 314 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 RTL3Q8N8U3 475 aaKnown RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 PRR26Q8N8Z3 221 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TRIML1Q8N9V2 468 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 LPCAT1Q8NF37 534 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 SPATA22Q8NHS9 363 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM255BQ8WV15 326 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 BCL2L2Q92843 193 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 ABTB1Q969K4 478 aaPredicted RBP4.85□□□□□ -1.63
LINC00397-202ENST00000606785 DHX58Q96C10 678 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 KLHL5Q96PQ7 755 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 OR1F2PQ96R84 312 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 RAD9AQ99638 391 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 SERINC1Q9NRX5 453 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 POT1Q9NUX5 634 aa4.85□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM30AQ9NV96 361 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms