RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 NELFEP18615 380 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 CDH3P22223 829 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 CBSP35520 551 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 MGAT5Q09328 741 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 GLE1Q53GS7 698 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 TMTC4Q5T4D3 741 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 TEDDM1Q5T9Z0 273 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 BROXQ5VW32 411 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 CNSTQ6PJW8 725 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 NEK10Q6ZWH5 1172 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 BMPERQ8N8U9 685 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 SIDT2Q8NBJ9 832 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 RAD51AP1Q96B01 352 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 MAP3K3Q99759 626 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 AARSD1Q9BTE6 412 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 RAB11FIP5Q9BXF6 653 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 XKR8Q9H6D3 395 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 C1GALT1Q9NS00 363 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 ZFATQ9P243 1243 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 POMT2Q9UKY4 750 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 SLC39A10Q9ULF5 831 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 CORO1CQ9ULV4 474 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 ICKQ9UPZ9 632 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 DHRS7Q9Y394 339 aa16.77■□□□□ 0.28
SHKBP1-212ENST00000596163 IGF2RP11717 2491 aa16.77■□□□□ 0.27
SHKBP1-212ENST00000596163 PIPSLA2A3N6 862 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 C9orf172C9J069 976 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 BTN3A3O00478 584 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 BTN3A1O00481 513 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 ZBTB11O95625 1053 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 AHSGP02765 367 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 GSTA2P09210 222 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 ENO3P13929 434 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 PRDX3P30048 256 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 RAB28P51157 221 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 CLCN7P51798 805 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 HSD11B2P80365 405 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 ACY1Q03154 408 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 FOXM1Q08050 763 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 GBX1Q14549 363 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 IL11RAQ14626 422 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 KYNUQ16719 465 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 LRRC8EQ6NSJ5 796 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 ZNF549Q6P9A3 640 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 CEP128Q6ZU80 1094 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 BPHLQ86WA6 291 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 ADGRF3Q8IZF5 1079 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC22A18Q96BI1 424 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 FAM136AQ96C01 138 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC41A2Q96JW4 573 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 PDE7BQ9NP56 450 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 FAM114A2Q9NRY5 505 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 TAS2R13Q9NYV9 303 aa16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 TRMT6Q9UJA5 497 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-212ENST00000596163 EPG5Q9HCE0 2579 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 IGHV5-51A0A0C4DH38 117 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 EIF3FO00303 357 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 C1orf105O95561 183 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 MPC1LP0DKB6 136 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 LIPCP11150 499 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 ABCG1P45844 678 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 RGS4P49798 205 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 KPNA2P52292 529 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 PPP1CAP62136 330 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC7A5Q01650 507 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 KIR2DS3Q14952 304 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 FASTKD3Q14CZ7 662 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 KLHL38Q2WGJ6 581 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 ANKS6Q68DC2 871 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 TRMT10BQ6PF06 316 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 SLC26A11Q86WA9 606 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 FBXO25Q8TCJ0 367 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 CDKL2Q92772 493 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 NAF1Q96HR8 494 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 GPR21Q99679 349 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 WDR83Q9BRX9 315 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 FAM129AQ9BZQ8 928 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 PLAC1Q9HBJ0 212 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 SIDT1Q9NXL6 827 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 ACTR10Q9NZ32 417 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 MOCS1Q9NZB8 636 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 FOXJ2Q9P0K8 574 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 GALPQ9UBC7 116 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 LNPEPQ9UIQ6 1025 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 B3GALT1Q9Y5Z6 326 aa16.75■□□□□ 0.27
SHKBP1-212ENST00000596163 STMND1H3BQB6 276 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 RASGRF2O14827 1237 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 KLK10O43240 276 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 MATN4O95460 622 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 CATP04040 527 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 CHRM5P08912 532 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 CD9P21926 228 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 PKLRP30613 574 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 UCNP55089 124 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 GUCY2DQ02846 1103 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 ACSBG2Q5FVE4 666 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 CYS1Q717R9 158 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 CCDC25Q86WR0 208 aa16.74■□□□□ 0.27
SHKBP1-212ENST00000596163 D2HGDHQ8N465 521 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms