RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 EPHA4P54764 986 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 MGAT5Q09328 741 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 GPR18Q14330 331 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 SLMAPQ14BN4 828 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 AGAP9Q5VTM2 703 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 METRNLQ641Q3 311 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 C3orf62Q6ZUJ4 267 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 DET1Q7L5Y6 550 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 CLDN19Q8N6F1 224 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 ZSCAN1Q8NBB4 408 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 AVL9Q8NBF6 648 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 C2CD4AQ8NCU7 369 aaPredicted RBP15.27■□□□□ 0.04
USB1-208ENST00000563207 LRRN4CLQ8ND94 238 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 LPGAT1Q92604 370 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 SH3KBP1Q96B97 665 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 ELMO2Q96JJ3 720 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 PANX3Q96QZ0 392 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 ASPSCR1Q9BZE9 553 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 P2RY12Q9H244 342 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 PLAC1Q9HBJ0 212 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 PPANQ9NQ55 473 aaKnown RBP15.27■□□□□ 0.04
USB1-208ENST00000563207 STARD5Q9NSY2 213 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 GNPTGQ9UJJ9 305 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 FBXO5Q9UKT4 447 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 PSMD13Q9UNM6 376 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 MRPS18BQ9Y676 258 aaKnown RBP15.27■□□□□ 0.04
USB1-208ENST00000563207 ASH1LQ9NR48 2969 aaKnown RBP15.27■□□□□ 0.03
USB1-208ENST00000563207 LILRA5A6NI73 299 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 KPNA5O15131 536 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 OR1I1O60431 355 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 STK17BO94768 372 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 UBXN7O94888 489 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 S1PR4O95977 384 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 C9P02748 559 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 PRKAR1AP10644 381 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 F8A1P23610 371 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 TNFRSF8P28908 595 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 ECHS1P30084 290 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 RPA4Q13156 261 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 ABRAXAS1Q6UWZ7 409 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 XKR5Q6UX68 686 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 LDB1Q86U70 411 aaPredicted RBP15.26■□□□□ 0.03
USB1-208ENST00000563207 HM13Q8TCT9 377 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 CDKL2Q92772 493 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 C9orf72Q96LT7 481 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.26■□□□□ 0.03
USB1-208ENST00000563207 STN1Q9H668 368 aaKnown RBP15.26■□□□□ 0.03
USB1-208ENST00000563207 SLC40A1Q9NP59 571 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 FBXO8Q9NRD0 319 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 IARS2Q9NSE4 1012 aaKnown RBP15.26■□□□□ 0.03
USB1-208ENST00000563207 IL1RAPL1Q9NZN1 696 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 ZFATQ9P243 1243 aa15.26■□□□□ 0.03
USB1-208ENST00000563207 CORO1CQ9ULV4 474 aaPredicted RBP15.26■□□□□ 0.03
USB1-208ENST00000563207 UBA6A0AVT1 1052 aaPredicted RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 LIN7AO14910 233 aaPredicted RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 CAPN5O15484 640 aaPredicted RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 PBLDP30039 288 aaPredicted RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 SLC1A2P43004 574 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 RAB15P59190 212 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 FOXM1Q08050 763 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 CTBP1Q13363 440 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 NFE2L1Q14494 772 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 TEDDM1Q5T9Z0 273 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 PTRHD1Q6GMV3 140 aaKnown RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 FAM92BQ6ZTR7 304 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 SLC26A11Q86WA9 606 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 DENND6AQ8IWF6 608 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 TRIM48Q8IWZ4 208 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 NLGN4XQ8N0W4 816 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 NLGN4YQ8NFZ3 816 aaPredicted RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 UBXN4Q92575 508 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 CCDC68Q9H2F9 335 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 LRRC4CQ9HCJ2 640 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 NFU1Q9UMS0 254 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 CFAP20Q9Y6A4 193 aaKnown RBP15.25■□□□□ 0.03
USB1-208ENST00000563207 PRSS21Q9Y6M0 314 aa15.25■□□□□ 0.03
USB1-208ENST00000563207 CYSRT1A8MQ03 144 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 POLR1CO15160 346 aaPredicted RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 DLGAP3O95886 979 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 AMD1P17707 334 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 MCM3P25205 808 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 OAS2P29728 719 aaKnown RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 SSTR1P30872 391 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 STX2P32856 288 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 PHBP35232 272 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 HALP42357 657 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 EIF3BP55884 814 aaKnown RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 COLEC12Q5KU26 742 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 DUS1LQ6P1R4 473 aaKnown RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 TRMT10BQ6PF06 316 aaKnown RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 CEACAM20Q6UY09 585 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 PTRH1Q86Y79 214 aaKnown RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 PLXDC1Q8IUK5 500 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 CFAP206Q8IYR0 622 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 ASZ1Q8WWH4 475 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 BIRC8Q96P09 236 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 NRTNQ99748 197 aa15.24■□□□□ 0.03
USB1-208ENST00000563207 GPN2Q9H9Y4 310 aaPredicted RBP15.24■□□□□ 0.03
USB1-208ENST00000563207 UCK1Q9HA47 277 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms