RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SCRG1O75711 98 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ST6GAL1P15907 406 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 CDH3P22223 829 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 PRDX3P30048 256 aaKnown RBP11.49□□□□□ -0.57
GABPB1-206ENST00000543881 FOXN2P32314 431 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 GRIA1P42261 906 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 CD151P48509 253 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 PRKG2Q13237 762 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 BOP1Q14137 746 aaKnown RBP11.49□□□□□ -0.57
GABPB1-206ENST00000543881 OASLQ15646 514 aaKnown RBP11.49□□□□□ -0.57
GABPB1-206ENST00000543881 P3H1Q32P28 736 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF789Q5FWF6 425 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 NAPRTQ6XQN6 538 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
GABPB1-206ENST00000543881 PRUNE1Q86TP1 453 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 TMEM126BQ8IUX1 230 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ADGRF3Q8IZF5 1079 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 OR13J1Q8NGT2 312 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 LRRC45Q96CN5 670 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 PITPNM3Q9BZ71 974 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 KLHL25Q9H0H3 589 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 TFB2MQ9H5Q4 396 aaKnown RBP11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ETNK1Q9HBU6 452 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 C1GALT1Q9NS00 363 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 ASF1BQ9NVP2 202 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 GPR83Q9NYM4 423 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 SMARCAL1Q9NZC9 954 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 SNX7Q9UNH6 387 aa11.49□□□□□ -0.57
GABPB1-206ENST00000543881 PIKFYVEQ9Y2I7 2098 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 SPTBP11277 2137 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 GSAPA4D1B5 854 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 ANKUB1A6NFN9 424 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 PSMD3O43242 534 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 LIASO43766 372 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 TPBGLP0DKB5 382 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 ETS1P14921 441 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 PVRP15151 417 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 MSNP26038 577 aaKnown RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 RIPPLY3P57055 190 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 PRKAA1Q13131 559 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 RPA4Q13156 261 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 PLEKHN1Q494U1 663 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 PLEKHS1Q5SXH7 462 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 TMTC4Q5T4D3 741 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 FAM69BQ5VUD6 431 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 AMIGO1Q86WK6 493 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 IQCKQ8N0W5 287 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 SLC34A3Q8N130 599 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 OR5AR1Q8NGP9 310 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 OR1L3Q8NH93 324 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 TFGQ92734 400 aaPredicted RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 ZNF778Q96MU6 729 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 SMAD5Q99717 465 aaKnown RBP11.48□□□□□ -0.57
GABPB1-206ENST00000543881 CHST8Q9H2A9 424 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 MVB12BQ9H7P6 319 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 VPS37BQ9H9H4 285 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 LATS2Q9NRM7 1088 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 SLC2A6Q9UGQ3 507 aa11.48□□□□□ -0.57
GABPB1-206ENST00000543881 BHMG1C9JSJ3 638 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 MATN2O00339 956 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 OR1I1O60431 355 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 SUN1O94901 812 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 AP2A2O94973 939 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 KLK3P07288 261 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ACADLP28330 430 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 CDC25BP30305 580 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 RORAP35398 523 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 NSG1P42857 185 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 LMAN1P49257 510 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ITGA1P56199 1179 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 RAPSNQ13702 412 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ELOAQ14241 798 aaKnown RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ITIH4Q14624 930 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 BRD3Q15059 726 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 PACS1Q6VY07 963 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 MED25Q71SY5 747 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 LINC00523Q86TU6 105 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 RNF10Q8N5U6 811 aaKnown RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ENDOVQ8N8Q3 282 aaKnown RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 TMEM102Q8N9M5 508 aaPredicted RBP11.47□□□□□ -0.57
GABPB1-206ENST00000543881 GLIS1Q8NBF1 620 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 OR8K5Q8NH50 307 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 C1orf54Q8WWF1 131 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 HDAC10Q969S8 669 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 LRFN5Q96NI6 719 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 TRAPPC9Q96Q05 1148 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 RANBP9Q96S59 729 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ACTR10Q9NZ32 417 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 TCFL5Q9UL49 500 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 ICKQ9UPZ9 632 aa11.47□□□□□ -0.57
GABPB1-206ENST00000543881 SLC5A10A0PJK1 596 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 TMEM150CB9EJG8 249 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 MEN1O00255 615 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 LIN7AO14910 233 aaPredicted RBP11.46□□□□□ -0.57
GABPB1-206ENST00000543881 HCRTR1O43613 425 aa11.46□□□□□ -0.57
GABPB1-206ENST00000543881 IFNB1P01574 187 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms