RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ANO5Q75V66 913 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 DPPA4Q7L190 304 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 CACNA2D4Q7Z3S7 1137 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 CERS3Q8IU89 383 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 DIS3L2Q8IYB7 885 aaKnown RBP3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 TEX11Q8IYF3 940 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 KCNG4Q8TDN1 519 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 MRPS27Q92552 414 aaKnown RBP3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 ARHGEF26Q96DR7 871 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 APOPT1Q96IL0 206 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 ACOX2Q99424 681 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 TMEM47Q9BQJ4 181 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 MXD3Q9BW11 206 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 RRAGDQ9NQL2 400 aaPredicted RBP3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 TCP11L1Q9NUJ3 509 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 PPP1R14DQ9NXH3 145 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 KCNJ14Q9UNX9 436 aa3.84□□□□□ -1.79
CTHRC1-204ENST00000520880 MYH7BA7E2Y1 1941 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 FAM237AA0A1B0GTK4 181 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 A0A1B0GVL5 298 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 CTAGE5O15320 804 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 AP5Z1O43299 807 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 WDHD1O75717 1129 aaPredicted RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 HNRNPA1P09651 372 aaKnown RBP eCLIP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 PFKFB1P16118 471 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 CMA1P23946 247 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 MARCKSP29966 332 aaPredicted RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 HALP42357 657 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 NOVP48745 357 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 NDUFA8P51970 172 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 FKBP1AP62942 108 aaKnown RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 GABPAQ06546 454 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 GRIK2Q13002 908 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 ZC2HC1CQ53FD0 456 aaPredicted RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 CCDC73Q6ZRK6 1079 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 PIWIL4Q7Z3Z4 852 aaKnown RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 RBM15BQ8NDT2 890 aaKnown RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 ANP32BQ92688 251 aaKnown RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 TRIM63Q969Q1 353 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF622Q969S3 477 aaKnown RBP eCLIP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 SENP5Q96HI0 755 aaPredicted RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 MAELQ96JY0 434 aaKnown RBP3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 LRMDAQ9H2I8 198 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 KAT14Q9H8E8 782 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 DBNDD1Q9H9R9 158 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 KCND2Q9NZV8 630 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 VPS54Q9P1Q0 977 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 C2CD2Q9Y426 696 aa3.83□□□□□ -1.8
CTHRC1-204ENST00000520880 RBBP6Q7Z6E9 1792 aaKnown RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 MYO3BQ8WXR4 1341 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 A0A1W2PP11 408 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 OR5K3A6NET4 321 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 FAM90A26D6RGX4 464 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 H0YIN7 160 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 CYTH3O43739 400 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 ECE2O60344 883 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 KINO60870 393 aaKnown RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF821O75541 412 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 TSPY3P0CV98 308 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 TSPY8P0CW00 308 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 SCG2P13521 617 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 CSF2RAP15509 400 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF23P17027 643 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 XBP1P17861 261 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 CNTFP26441 200 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 KIF5BP33176 963 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 UBA7P41226 1012 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 LUMP51884 338 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 IRX1P78414 480 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 AKAP17AQ02040 695 aaKnown RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 GPR68Q15743 365 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 STX1AQ16623 288 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 MYLK3Q32MK0 819 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 RILPL1Q5EBL4 403 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 NAA35Q5VZE5 725 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 RESP18Q5W5W9 173 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 CDC42EP5Q6NZY7 148 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 SASS6Q6UVJ0 657 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 C11orf57Q6ZUT1 292 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 LUZP1Q86V48 1076 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 ZNF444Q8N0Y2 327 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 WDR20Q8TBZ3 569 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 IGSF8Q969P0 613 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 TEKT1Q969V4 418 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 TRIM44Q96DX7 344 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 ATOH8Q96SQ7 321 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 PCGF1Q9BSM1 259 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 BRF2Q9HAW0 419 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 LTB4R2Q9NPC1 389 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 MAD2L2Q9UI95 211 aa3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 FBXO2Q9UK22 296 aaPredicted RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 DICER1Q9UPY3 1922 aaKnown RBP3.82□□□□□ -1.8
CTHRC1-204ENST00000520880 PARP14Q460N5 1801 aa3.81□□□□□ -1.8
CTHRC1-204ENST00000520880 A0A087WWV3 80 aa3.81□□□□□ -1.8
CTHRC1-204ENST00000520880 A0A087X002 238 aa3.81□□□□□ -1.8
CTHRC1-204ENST00000520880 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
CTHRC1-204ENST00000520880 LRRC53A6NM62 1247 aa3.81□□□□□ -1.8
CTHRC1-204ENST00000520880 YDJCA8MPS7 323 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms