RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 SPRED1Q7Z699 444 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 RIBC1Q8N443 379 aaPredicted RBP14.56□□□□□ -0.08
NUP54-213ENST00000513352 OR52E1Q8NGJ3 308 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 OR10G6Q8NH81 332 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 LCN9Q8WX39 176 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 ABCG4Q9H172 646 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 XKR8Q9H6D3 395 aa14.56□□□□□ -0.08
NUP54-213ENST00000513352 DCDC2BA2VCK2 349 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 KRT87PA6NCN2 255 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 LILRA5A6NI73 299 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 GOLGA8RI6L899 631 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 CDC7O00311 574 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 GIPC1O14908 333 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 PSIP1O75475 530 aaKnown RBP14.55□□□□□ -0.08
NUP54-213ENST00000513352 RPLP0P05388 317 aaKnown RBP14.55□□□□□ -0.08
NUP54-213ENST00000513352 TYRP1P17643 537 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 GPR3P46089 330 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 CCL7P80098 99 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 ZNF844Q08AG5 666 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 SP140Q13342 867 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 CASP8Q14790 479 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 NKAIN2Q5VXU1 208 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 ARMC6Q6NXE6 501 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 KLC3Q6P597 504 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 ZNF438Q7Z4V0 828 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 CCDC91Q7Z6B0 441 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 CNPY4Q8N129 248 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 RAB42Q8N4Z0 105 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 OR4E2Q8NGC2 313 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 MCOLN3Q8TDD5 553 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 ASB11Q8WXH4 323 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 EXT2Q93063 718 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 RAD51AP1Q96B01 352 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 NXNL1Q96CM4 212 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 SCYL1Q96KG9 808 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 TRIM54Q9BYV2 358 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 DERL2Q9GZP9 239 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 SRMSQ9H3Y6 488 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 NMRAL1Q9HBL8 299 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 ADAMTS6Q9UKP5 1117 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 UNC13CQ8NB66 2214 aa14.55□□□□□ -0.08
NUP54-213ENST00000513352 DMXL1Q9Y485 3027 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 A0A1W2PPM1 405 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 OR6C74A6NCV1 312 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 FOXO6A8MYZ6 492 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TM4SF5O14894 197 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 RGS16O15492 202 aaPredicted RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 DUX1O43812 170 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 UBXN7O94888 489 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 PROS1P07225 676 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 HIST1H2AGP0C0S8 130 aaPredicted RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 PYGBP11216 843 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 CEACAM1P13688 526 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 PNLIPP16233 465 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TFEBP19484 476 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 HIST1H2ADP20671 130 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 EPHA4P54764 986 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 ATP6V0D1P61421 351 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TSTA3Q13630 321 aaPredicted RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 RASA2Q15283 850 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TSNQ15631 228 aaKnown RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 FAM83EQ2M2I3 478 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 CCSMST1Q4G0I0 132 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 LRIG3Q6UXM1 1119 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TIFABQ6ZNK6 161 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 GLRX5Q86SX6 157 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 TAX1BP1Q86VP1 789 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 CYP4X1Q8N118 509 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 C2orf73Q8N5S3 287 aaPredicted RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 ZFPM2Q8WW38 1151 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 NCSTNQ92542 709 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 ISL2Q96A47 359 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 PDLIM5Q96HC4 596 aaKnown RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 CABS1Q96KC9 395 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 HIST1H2AHQ96KK5 128 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 IL17FQ96PD4 163 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 HIST1H2AJQ99878 128 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 H2AFJQ9BTM1 129 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 UCK1Q9HA47 277 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 UTP6Q9NYH9 597 aaKnown RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 IKZF3Q9UKT9 509 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 RNF112Q9ULX5 631 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 ICKQ9UPZ9 632 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 APOBEC2Q9Y235 224 aaKnown RBP14.54□□□□□ -0.08
NUP54-213ENST00000513352 DNAH14Q0VDD8 3507 aa14.54□□□□□ -0.08
NUP54-213ENST00000513352 CNOT1A5YKK6 2376 aaKnown RBP14.53□□□□□ -0.08
NUP54-213ENST00000513352 IGHV1OR21-1A0A087WYE8 117 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 GSAPA4D1B5 854 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 GOLGA6L10A6NI86 522 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 GFYI3L273 518 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 SLC16A5O15375 505 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 RFPL1O75677 317 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 KCNK5O95279 499 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 WISP3O95389 354 aaPredicted RBP14.53□□□□□ -0.08
NUP54-213ENST00000513352 GUCA1CO95843 209 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 GP1BAP07359 652 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 FTH1P19P0C7X4 201 aa14.53□□□□□ -0.08
NUP54-213ENST00000513352 CD1DP15813 335 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms