RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 MDH1BQ5I0G3 518 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 ARMC4Q5T2S8 1044 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 C1QTNF12Q5T7M4 302 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 KRT80Q6KB66 452 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 FAM43BQ6ZT52 329 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 KCTD8Q6ZWB6 473 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 CHST3Q7LGC8 479 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 NUP54Q7Z3B4 507 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 CCDC186Q7Z3E2 898 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 LONP2Q86WA8 852 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 VSIG1Q86XK7 387 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 PLD3Q8IV08 490 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 FOXP4Q8IVH2 680 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 GPALPP1Q8IXQ4 340 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 FAM9BQ8IZU0 186 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 ANKRD13CQ8N6S4 541 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 MAPKAPK5-AS1Q8N8E1 139 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 POC1AQ8NBT0 407 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 TRIM58Q8NG06 486 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 OR2T12Q8NG77 320 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 PPP4R1Q8TF05 950 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 ZNF473Q8WTR7 871 aaKnown RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 HSD17B8Q92506 261 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 MRPS27Q92552 414 aaKnown RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 SPSB1Q96BD6 273 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 DHX58Q96C10 678 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 HDAC11Q96DB2 347 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 LMLNQ96KR4 655 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 SGK494Q96LW2 274 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 FNDC11Q9BVV2 318 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 SDF2L1Q9HCN8 221 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 DNAJC4Q9NNZ3 241 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 A4GALTQ9NPC4 353 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 TCF7L2Q9NQB0 619 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 PIH1D3Q9NQM4 214 aaKnown RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 SERINC1Q9NRX5 453 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 ABCF3Q9NUQ8 709 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.12□□□□□ -2.07
ITGB1-213ENST00000484088 PADI2Q9Y2J8 665 aa2.12□□□□□ -2.07
ITGB1-213ENST00000484088 C15orf62A8K5M9 175 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ERVV-2B6SEH9 535 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 GAPDHSO14556 408 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 TCERG1O14776 1098 aaKnown RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 CAPN9O14815 690 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 RNASEH1O60930 286 aaKnown RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 SIX3O95343 332 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 NADKO95544 446 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ACSL3O95573 720 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 PLGP00747 810 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 HAPLN1P10915 354 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 GJA1P17302 382 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 CKMT2P17540 419 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ADRA2CP18825 462 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 CD27P26842 260 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 TIA1P31483 386 aaKnown RBP eCLIP2.11□□□□□ -2.072e-7■□□□□ 10.4
ITGB1-213ENST00000484088 MTHFRP42898 656 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 PSMC4P43686 418 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 KCNJ4P48050 445 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 MAPK12P53778 367 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 LINC01547P58512 204 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 KRTAP10-5P60370 271 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 CX3CL1P78423 397 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 DMPKQ09013 629 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 HSPB3Q12988 150 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ALDH1L2Q3SY69 923 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 UGT3A2Q3SY77 523 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ZC2HC1CQ53FD0 456 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 PHLDA2Q53GA4 152 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 XKR3Q5GH77 459 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 TECRLQ5HYJ1 363 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 WDR38Q5JTN6 314 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 C6orf136Q5SQH8 315 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 MPP7Q5T2T1 576 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 C19orf48Q6RUI8 117 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 MFSD6Q6ZSS7 791 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 FAM47EQ6ZV65 393 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 USP43Q70EL4 1123 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ERN2Q76MJ5 926 aaKnown RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ANKRD33Q7Z3H0 272 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ABI3BPQ7Z7G0 1075 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ANKRD23Q86SG2 305 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 FAM219AQ8IW50 185 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 CAMKVQ8NCB2 501 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 OR11H4Q8NGC9 324 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 KIF18AQ8NI77 898 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 SSMEM1Q8WWF3 244 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ATL1Q8WXF7 558 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ROBO4Q8WZ75 1007 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 IRGQQ8WZA9 623 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 EXT2Q93063 718 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 SLAMF9Q96A28 289 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ZNF524Q96C55 264 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 MTERF3Q96E29 417 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 OTUB1Q96FW1 271 aaPredicted RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 ST6GAL2Q96JF0 529 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 FAM20AQ96MK3 541 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 SPATA33Q96N06 139 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 RAD9AQ99638 391 aa2.11□□□□□ -2.07
ITGB1-213ENST00000484088 TRMT61BQ9BVS5 477 aaKnown RBP2.11□□□□□ -2.07
ITGB1-213ENST00000484088 LAT2Q9GZY6 243 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms