RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 OLFM1Q99784 485 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 AKTIPQ9H8T0 292 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 HCFC1R1Q9NWW0 138 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMPD4-218ENST00000482171 SBF2Q86WG5 1849 aa11.1□□□□□ -0.63
SMPD4-218ENST00000482171 G3V2T6 193 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 MTHFD1P11586 935 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 LIPEQ05469 1076 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 TOP3AQ13472 1001 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF829Q3KNS6 432 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CCNYL2Q5T2Q4 361 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 RANBP10Q6VN20 620 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 GALNT5Q7Z7M9 940 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ZC3H7AQ8IWR0 971 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 NSUN5Q96P11 429 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 MTG2Q9H4K7 406 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 RASSF1Q9NS23 344 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 FBXL21Q9UKT6 434 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 SRCAPQ6ZRS2 3230 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 EFCAB10A6NFE3 127 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CST5P28325 142 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 PDZK1Q5T2W1 519 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CYS1Q717R9 158 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CPA6Q8N4T0 437 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CXorf40BQ96DE9 158 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CITED4Q96RK1 184 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 TEX12Q9BXU0 123 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DUSP12Q9UNI6 340 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CFAP20Q9Y6A4 193 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 USP3Q9Y6I4 520 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DHRS4L1P0CG22 281 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 THRBP10828 461 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CAPGP40121 348 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ELP6Q0PNE2 266 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 TMIGD2Q96BF3 282 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 RTP3Q9BQQ7 232 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 TMCC3Q9ULS5 477 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 EPOP01588 193 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ADH5P11766 374 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 GDI1P31150 447 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 MTHFRP42898 656 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ETV4P43268 484 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 RHDQ02161 417 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 PPP1R8Q12972 351 aaKnown RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 COL9A2Q14055 689 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DSC3Q14574 896 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 PPP1R3AQ16821 1122 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 FGD3Q5JSP0 725 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CAPN13Q6MZZ7 669 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ZNF549Q6P9A3 640 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 EPGNQ6UW88 154 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 TMEM25Q86YD3 366 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 KRT78Q8N1N4 520 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 OR2T12Q8NG77 320 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 CLSTN3Q9BQT9 956 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 ALG2Q9H553 416 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 KCNK13Q9HB14 408 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 PRKAB1Q9Y478 270 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 BACE2Q9Y5Z0 518 aa11.09□□□□□ -0.63
SMPD4-218ENST00000482171 DOCK3Q8IZD9 2030 aa11.08□□□□□ -0.63
SMPD4-218ENST00000482171 RP1L1Q8IWN7 2480 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-218ENST00000482171 CAPN15O75808 1086 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 BCAS2O75934 225 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-218ENST00000482171 ANXA6P08133 673 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 SLC6A4P31645 630 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 TIE1P35590 1138 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 PGFP49763 221 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 CDKN1CP49918 316 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-218ENST00000482171 SLC16A1P53985 500 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 CDKN2DP55273 166 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 GRM2Q14416 872 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 FAM174BQ3ZCQ3 159 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 CYP20A1Q6UW02 462 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 VITQ6UXI7 678 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 TPRG1Q6ZUI0 275 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 HIPK1Q86Z02 1210 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 ACVR1CQ8NER5 493 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 ENKURQ8TC29 256 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 IRF7Q92985 503 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 ISOC1Q96CN7 298 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 FBXL20Q96IG2 436 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 NODALQ96S42 347 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 RAD9AQ99638 391 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 RNF38Q9H0F5 515 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 IFT80Q9P2H3 777 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-218ENST00000482171 KLHL3Q9UH77 587 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 KIAA1217Q5T5P2 1943 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.08□□□□□ -0.64
SMPD4-218ENST00000482171 SLC22A2O15244 555 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 GPR39O43194 453 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 KERAO60938 352 aa11.08□□□□□ -0.64
SMPD4-218ENST00000482171 RECQL5O94762 991 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms