RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ZC3H7BQ9UGR2 993 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 POLG2Q9UHN1 485 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 TSR3Q9UJK0 312 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 CDC23Q9UJX2 597 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 FBXO5Q9UKT4 447 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 PLAGL1Q9UM63 463 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 RUVBL2Q9Y230 463 aaKnown RBP12.52□□□□□ -0.41
COL5A1-206ENST00000465877 PCDHB11Q9Y5F2 797 aa12.52□□□□□ -0.41
COL5A1-206ENST00000465877 E7ESA3 106 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 POLR1CO15160 346 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 URI1O94763 535 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 EBLN1P0CF75 366 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ERVK-10P10266 1014 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CHRM3P20309 590 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CDH3P22223 829 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ATP5DP30049 168 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 PKLRP30613 574 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 BDKRB1P46663 353 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 PDIA2Q13087 525 aaKnown RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CALCOCO2Q13137 446 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 WHAMMP3Q1A5X7 153 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 BROXQ5VW32 411 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CNSTQ6PJW8 725 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 KMT5CQ86Y97 462 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ANKMY2Q8IV38 441 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ADGRF3Q8IZF5 1079 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CARFQ8N187 725 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 SIDT2Q8NBJ9 832 aaKnown RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 C2CD4AQ8NCU7 369 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 FBXO36Q8NEA4 188 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 CFAP61Q8NHU2 1237 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 GABPB2Q8TAK5 448 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 SKA2Q8WVK7 121 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ZNF592Q92610 1267 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 KCNJ9Q92806 393 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 TRIM44Q96DX7 344 aaPredicted RBP12.51□□□□□ -0.41
COL5A1-206ENST00000465877 SLC41A2Q96JW4 573 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 PPM1MQ96MI6 270 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 OR6C1Q96RD1 312 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 ZPBPQ9BS86 351 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 WDR70Q9NW82 654 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 SOHLH2Q9NX45 425 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 WHRNQ9P202 907 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 SLC17A6Q9P2U8 582 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 LHX6Q9UPM6 363 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 NFS1Q9Y697 457 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 COMMD10Q9Y6G5 202 aa12.51□□□□□ -0.41
COL5A1-206ENST00000465877 C2orf74A8MZ97 194 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 ZBTB11O95625 1053 aaPredicted RBP12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TPBGLP0DKB5 382 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 ARL4DP49703 201 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 RAB28P51157 221 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 CLCN7P51798 805 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 UCNP55089 124 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TMPRSS3P57727 454 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TUBB3Q13509 450 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 KCNAB1Q14722 419 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TGIF1Q15583 401 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TTLL9Q3SXZ7 439 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 C8orf74Q6P047 294 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 ZNF549Q6P9A3 640 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 TRMT10BQ6PF06 316 aaKnown RBP12.5□□□□□ -0.41
COL5A1-206ENST00000465877 FBXO38Q6PIJ6 1188 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 SPESP1Q6UW49 350 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 KIAA0408Q6ZU52 694 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 DTX1Q86Y01 620 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 ZBED8Q8IZ13 594 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 SLC30A3Q99726 388 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 MENTQ9BUN1 341 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 PPANQ9NQ55 473 aaKnown RBP12.5□□□□□ -0.41
COL5A1-206ENST00000465877 C1GALT1Q9NS00 363 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 ACTR10Q9NZ32 417 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 OR6C2Q9NZP2 312 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 GALPQ9UBC7 116 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 BTRCQ9Y297 605 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 MED16Q9Y2X0 877 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 UTP11Q9Y3A2 253 aaKnown RBP12.5□□□□□ -0.41
COL5A1-206ENST00000465877 MRFAP1Q9Y605 127 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 FER1L5A0AVI2 2057 aa12.5□□□□□ -0.41
COL5A1-206ENST00000465877 PIPSLA2A3N6 862 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 KRT87PA6NCN2 255 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 RAD1O60671 282 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 STK17BO94768 372 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 HAUS5O94927 633 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 CHRM5P08912 532 aaPredicted RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 UGT2B7P16662 529 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 PRDX3P30048 256 aaKnown RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
COL5A1-206ENST00000465877 CXADRP78310 365 aa12.49□□□□□ -0.41
COL5A1-206ENST00000465877 HSD11B2P80365 405 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms