RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 MCCC1Q96RQ3 725 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 VAT1Q99536 393 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 TMEM134Q9H6X4 195 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ABCB8Q9NUT2 735 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 KLHL21Q9UJP4 597 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 SLC22A5O76082 557 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CBX5P45973 191 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 DAPP51397 102 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CREMQ03060 361 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 ATP6AP1LQ52LC2 224 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CHPFQ8IZ52 775 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 PAF1Q8N7H5 531 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 NLGN4YQ8NFZ3 816 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 APH1BQ8WW43 257 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 SPATA9Q9BWV2 254 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 GLIS2Q9BZE0 524 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CYP3A43Q9HB55 503 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 JPH1Q9HDC5 661 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 AMBNQ9NP70 447 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 HSPE1-MOB4S4R3N1 261 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 GOLGB1Q14789 3259 aaKnown RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 LTBP1Q14766 1721 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 MRPS14O60783 128 aaKnown RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 PGRP06401 933 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 FGF4P08620 206 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 RPS3P23396 243 aaKnown RBP eCLIP12.54□□□□□ -0.4
HERC3-203ENST00000407637 CYP4F2P78329 520 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 TEKQ02763 1124 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CYP4F3Q08477 520 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 TBCEQ15813 527 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 FBXO48Q5FWF7 155 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 TIGD7Q6NT04 549 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 TMEM207Q6UWW9 146 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 CEP68Q76N32 757 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 LAX1Q8IWV1 398 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 TTC29Q8NA56 475 aaPredicted RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
HERC3-203ENST00000407637 NCLNQ969V3 563 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 GORASP2Q9H8Y8 452 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 MCCC2Q9HCC0 563 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 ASAH2Q9NR71 780 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 TNFRSF10DQ9UBN6 386 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 SCML1Q9UN30 329 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 NEUROG3Q9Y4Z2 214 aa12.54□□□□□ -0.4
HERC3-203ENST00000407637 NRXN2Q9P2S2 1712 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PCDHGA12O60330 932 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 CRCPO75575 148 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 NR3C2P08235 984 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 HSMCR30P0CW71 290 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 UBE3AQ05086 875 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 GARNL3Q5VVW2 1013 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 TIGD3Q6B0B8 471 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 TYW3Q6IPR3 259 aaKnown RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 NAPEPLDQ6IQ20 393 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PIM3Q86V86 326 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 COMMD7Q86VX2 200 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PHC2Q8IXK0 858 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 OR10A6Q8NH74 314 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 ZNF675Q8TD23 568 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 HERVK_113Q902F9 699 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 CCDC115Q96NT0 180 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 GTPBP2Q9BX10 602 aaKnown RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 DYRK4Q9NR20 520 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 RCOR3Q9P2K3 495 aaPredicted RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 STOML2Q9UJZ1 356 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 FEM1BQ9UK73 627 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 AUP1Q9Y679 476 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 FAM234BA2RU67 622 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 ACKR2O00590 384 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 DFNA5O60443 496 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 ATG13O75143 517 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PAPSS2O95340 614 aaPredicted RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 FHP07954 510 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 CLEC2LP0C7M8 214 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 LCP1P13796 627 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 SLC19A1P41440 591 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 RGS1Q08116 209 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 TATDN3Q17R31 274 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PCID2Q5JVF3 399 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 CELF3Q5SZQ8 465 aaKnown RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 BRAT1Q6PJG6 821 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 SPATA19Q7Z5L4 167 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 ISCA2Q86U28 154 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 GLCCI1Q86VQ1 547 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 C2orf69Q8N8R5 385 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 ZNF548Q8NEK5 533 aaPredicted RBP12.53□□□□□ -0.4
HERC3-203ENST00000407637 SPATA22Q8NHS9 363 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 BLOC1S5Q8TDH9 187 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 SRRQ9GZT4 340 aa12.53□□□□□ -0.4
HERC3-203ENST00000407637 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms