RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ARMC3Q5W041 872 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 PTRH1Q86Y79 214 aaKnown RBP17.17■□□□□ 0.34
HDDC3-201ENST00000330334 SLC22A15Q8IZD6 547 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 MPP5Q8N3R9 675 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 OR1L3Q8NH93 324 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 OR2A14Q96R47 310 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 NRTNQ99748 197 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 AP1M1Q9BXS5 423 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 NLNQ9BYT8 704 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 ZNF71Q9NQZ8 489 aaPredicted RBP17.17■□□□□ 0.34
HDDC3-201ENST00000330334 CHRAC1Q9NRG0 131 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 TREX1Q9NSU2 369 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 ANAPC5Q9UJX4 755 aa17.17■□□□□ 0.34
HDDC3-201ENST00000330334 SEC16AO15027 2179 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-201ENST00000330334 RFPL1O75677 317 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 SLCO2B1O94956 709 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 FGGP02679 453 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 CHRM5P08912 532 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-201ENST00000330334 CCR7P32248 378 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 ITGA1P56199 1179 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 KIR2DS3Q14952 304 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 BRD3Q15059 726 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 CDHR3Q6ZTQ4 885 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 HOOK3Q86VS8 718 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 FLVCR1-AS1Q8TAF5 88 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 CHST8Q9H2A9 424 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 ACTR5Q9H9F9 607 aaPredicted RBP17.16■□□□□ 0.34
HDDC3-201ENST00000330334 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 BFARQ9NZS9 450 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 CDYLQ9Y232 598 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 MAN2B2Q9Y2E5 1009 aa17.16■□□□□ 0.34
HDDC3-201ENST00000330334 E7EQ34 232 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 CD3EAPO15446 510 aaKnown RBP17.15■□□□□ 0.34
HDDC3-201ENST00000330334 RPN2P04844 631 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 UGT2B7P16662 529 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 CYP2A7P20853 494 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 AOAHP28039 575 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 TLE1Q04724 770 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 SEMA3AQ14563 771 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 SLC5A12Q1EHB4 618 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 PRAMEF17Q5VTA0 474 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 GSTA5Q7RTV2 222 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 TMEM135Q86UB9 458 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 LRRC6Q86X45 466 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 C19orf47Q8N9M1 422 aaKnown RBP17.15■□□□□ 0.34
HDDC3-201ENST00000330334 CLIP3Q96DZ5 547 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 RUFY1Q96T51 708 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 KIFC1Q9BW19 673 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 MRM3Q9HC36 420 aaKnown RBP17.15■□□□□ 0.34
HDDC3-201ENST00000330334 CATSPERZQ9NTU4 200 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 TLK1Q9UKI8 766 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 AP1M2Q9Y6Q5 423 aa17.15■□□□□ 0.34
HDDC3-201ENST00000330334 H3BMH7 237 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 PYCARD-AS1I3L0S3 204 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 APOA4P06727 396 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 CAPN1P07384 714 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 PVRP15151 417 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TPSB2P20231 275 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 RAB28P51157 221 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 SESN2P58004 480 aaPredicted RBP17.14■□□□□ 0.33
HDDC3-201ENST00000330334 HSPA14Q0VDF9 509 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 KLRB1Q12918 225 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TPSAB1Q15661 275 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 KYNUQ16719 465 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 LRRC8BQ6P9F7 803 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 UNC5DQ6UXZ4 953 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 NAPRTQ6XQN6 538 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 SYTL1Q8IYJ3 562 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 GPR135Q8IZ08 494 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 ADAMTS17Q8TE56 1095 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 MENTQ9BUN1 341 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TRIM4Q9C037 500 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 P2RY12Q9H244 342 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 FAM60AQ9NP50 221 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 SPHK1Q9NYA1 384 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TCFL5Q9UL49 500 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TDRKHQ9Y2W6 561 aaKnown RBP17.14■□□□□ 0.33
HDDC3-201ENST00000330334 SPTBP11277 2137 aa17.14■□□□□ 0.33
HDDC3-201ENST00000330334 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 A0A0J9YY10 115 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 KPNA5O15131 536 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 ZNF749O43361 778 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 NRDCO43847 1150 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 CEP104O60308 925 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 RPS3P23396 243 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 MAGEA6P43360 314 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 KCNJ1P48048 391 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 GABRA4P48169 554 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 RPS18P62269 152 aaKnown RBP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 BASP1P80723 227 aaKnown RBP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 CCZ1BP86790 482 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 IL10RAQ13651 578 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 ZIC1Q15915 447 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 ZNF385CQ66K41 422 aaPredicted RBP17.13■□□□□ 0.33
HDDC3-201ENST00000330334 LCN10Q6JVE6 187 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 SLC22A18Q96BI1 424 aa17.13■□□□□ 0.33
HDDC3-201ENST00000330334 PANX3Q96QZ0 392 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms