RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZFP69Q49AA0 526 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 ZCCHC8Q6NZY4 707 aaKnown RBP17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 SERINC5Q86VE9 423 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 UBQLNLQ8IYU4 475 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 SIMC1Q8NDZ2 872 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 RNF34Q969K3 372 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 KIAA1191Q96A73 305 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 MED30Q96HR3 178 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 DEPDC7Q96QD5 511 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 REXO4Q9GZR2 422 aaKnown RBP17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 SIK2Q9H0K1 926 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 HEBP1Q9NRV9 189 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 QPCTLQ9NXS2 382 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 CDH9Q9ULB4 789 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 KCTD3Q9Y597 815 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 MAU2Q9Y6X3 613 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 MROH6A6NGR9 719 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 GABRDO14764 452 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 ECI2O75521 394 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 SCELO95171 688 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 SLC2A3P11169 496 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 NAT1P18440 290 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 MSH3P20585 1137 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 S100A5P33763 92 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 AGTR2P50052 363 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 PON2Q15165 354 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 RBBP7Q16576 425 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 Q6ZSR9 355 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 LRRC8DQ7L1W4 858 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 TAC4Q86UU9 113 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 BEND7Q8N7W2 519 aaPredicted RBP17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 STAG3L4Q8TBR4 150 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 BARD1Q99728 777 aaKnown RBP17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 TMEM246Q9BRR3 403 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 THUMPD3Q9BV44 507 aaKnown RBP17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 CDADC1Q9BWV3 514 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 RNF39Q9H2S5 420 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 IKZF5Q9H5V7 419 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 GOLGA2P5Q9HBQ8 144 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 CNGB3Q9NQW8 809 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 BOLA1Q9Y3E2 137 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 PCDHGB6Q9Y5F9 930 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 GMPPBQ9Y5P6 360 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 TRPV2Q9Y5S1 764 aa17.34■□□□□ 0.37
CDKN1B-201ENST00000228872 MIA3Q5JRA6 1907 aa17.33■□□□□ 0.37
CDKN1B-201ENST00000228872 SMIM28A0A1B0GU29 152 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 ELOVL7A1L3X0 281 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 FKTNO75072 461 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 CD4P01730 458 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 G6PDP11413 515 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 ARL1P40616 181 aaPredicted RBP17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 PRMT2P55345 433 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 IL1RL1Q01638 556 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 CYP4F3Q08477 520 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 ARHGEF6Q15052 776 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 SNAP47Q5SQN1 464 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 DET1Q7L5Y6 550 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 GALNT12Q8IXK2 581 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 AMER2Q8N7J2 671 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 OR52E4Q8NGH9 312 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 TBCDQ9BTW9 1192 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 MAGIXQ9H6Y5 334 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 POPDC3Q9HBV1 291 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 PCTPQ9UKL6 214 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 AGO1Q9UL18 857 aaKnown RBP17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 ERVW-1Q9UQF0 538 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 WBP11Q9Y2W2 641 aaKnown RBP17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 CENPXA8MT69 81 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 M0QZ92 97 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 ENPP3O14638 875 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 GADD45AP24522 165 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 KRT20P35900 424 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 GALK2Q01415 458 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 CYP20A1Q6UW02 462 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 PRR23CQ6ZRP0 262 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 SIGLEC11Q96RL6 698 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 SMOQ99835 787 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 DCAF13Q9NV06 445 aaKnown RBP17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 NDFIP2Q9NV92 336 aa17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 CRNNQ9UBG3 495 aaPredicted RBP17.33■□□□□ 0.36
CDKN1B-201ENST00000228872 BRCA2P51587 3418 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 GOLGA8CPA6NN73 597 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 MED26O95402 600 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 ABCB1P08183 1280 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 PPP3CCP48454 512 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 LAPTM4AQ15012 233 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 MAD2L1BPQ15013 274 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 TSNQ15631 228 aaKnown RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 PRSS36Q5K4E3 855 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SHQ1Q6PI26 577 aaKnown RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 BHLHA9Q7RTU4 235 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 RNF180Q86T96 592 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 RASSF5Q8WWW0 418 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 ST6GAL2Q96JF0 529 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SLC25A51Q9H1U9 297 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 PRDM8Q9NQV8 689 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 EHD3Q9NZN3 535 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 SNX6Q9UNH7 406 aa17.32■□□□□ 0.36
CDKN1B-201ENST00000228872 RNF6Q9Y252 685 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms