RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 STEAP4Q687X5 459 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 DUPD1Q68J44 220 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 UNC5AQ6ZN44 842 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 ARHGAP22Q7Z5H3 698 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 GALNT7Q86SF2 657 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 CTAGE6Q86UF2 777 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 DENND6AQ8IWF6 608 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 CNTN4Q8IWV2 1026 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 CTAGE4Q8IX94 777 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 ZBED8Q8IZ13 594 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 ZBTB2Q8N680 514 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 FBXO36Q8NEA4 188 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 OR52E1Q8NGJ3 308 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 MAGEC3Q8TD91 643 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 UBXN4Q92575 508 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 KCNJ9Q92806 393 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 BIRC8Q96P09 236 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 TEFMQ96QE5 360 aaKnown RBP12.64□□□□□ -0.39
CLK3-224ENST00000568605 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 ZNF768Q9H5H4 540 aaKnown RBP12.64□□□□□ -0.39
CLK3-224ENST00000568605 TFB2MQ9H5Q4 396 aaKnown RBP12.64□□□□□ -0.39
CLK3-224ENST00000568605 HRASLS2Q9NWW9 162 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 NSMCE4AQ9NXX6 385 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 ZFATQ9P243 1243 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 CORO1CQ9ULV4 474 aaPredicted RBP12.64□□□□□ -0.39
CLK3-224ENST00000568605 PCDHB11Q9Y5F2 797 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
CLK3-224ENST00000568605 WDFY3Q8IZQ1 3526 aa12.64□□□□□ -0.39
CLK3-224ENST00000568605 A0A1W2PNU3 283 aaPredicted RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 GSAPA4D1B5 854 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 B4E171 279 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 MAP3K7O43318 606 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 VPS26AO75436 327 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 S1PR4O95977 384 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 ERVK-10P10266 1014 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 ITIH1P19827 911 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 CCNFP41002 786 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 TSPAN7P41732 249 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 LEPRP48357 1165 aaKnown RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 ARL4DP49703 201 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 MPP1Q00013 466 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 ILF2Q12905 390 aaKnown RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 FRG1Q14331 258 aaKnown RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 HP1BP3Q5SSJ5 553 aaPredicted RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 LRRC8EQ6NSJ5 796 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 UGT3A1Q6NUS8 523 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 CEACAM20Q6UY09 585 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 NAPRTQ6XQN6 538 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 FAM92BQ6ZTR7 304 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 CEP128Q6ZU80 1094 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 AMIGO1Q86WK6 493 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 KMT5CQ86Y97 462 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 ANKMY2Q8IV38 441 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 CEP112Q8N8E3 955 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 C2CD4AQ8NCU7 369 aaPredicted RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 OR4E2Q8NGC2 313 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 OR5AR1Q8NGP9 310 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 PYROXD1Q8WU10 500 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 KCNE4Q8WWG9 221 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 JPH3Q8WXH2 748 aaPredicted RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 PRR11Q96HE9 360 aaPredicted RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 DCBLD2Q96PD2 775 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 TAAR9Q96RI9 348 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 DDA1Q9BW61 102 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 FAM129AQ9BZQ8 928 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 KLHL42Q9P2K6 505 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 TDRKHQ9Y2W6 561 aaKnown RBP12.63□□□□□ -0.39
CLK3-224ENST00000568605 AHCTF1Q8WYP5 2266 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 ASPMQ8IZT6 3477 aa12.63□□□□□ -0.39
CLK3-224ENST00000568605 KMT2BQ9UMN6 2715 aaPredicted RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 OR6C74A6NCV1 312 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 EFCAB7A8K855 629 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 C2orf74A8MZ97 194 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 AGRPO00253 132 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 NVLO15381 856 aaKnown RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 ENO3P13929 434 aaPredicted RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 SLC5A2P31639 672 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 PLTPP55058 493 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 CBLBQ13191 982 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 PRKG2Q13237 762 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 DCAF12Q5T6F0 453 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 PALM2Q8IXS6 379 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 CFAP61Q8NHU2 1237 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 CDKL2Q92772 493 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 ART4Q93070 314 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 PWWP2AQ96N64 755 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 ZPBPQ9BS86 351 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 SAYSD1Q9NPB0 183 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 LATS2Q9NRM7 1088 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 FAM114A2Q9NRY5 505 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 SLC39A1Q9NY26 324 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 GRHL1Q9NZI5 618 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 TRMT6Q9UJA5 497 aaKnown RBP12.62□□□□□ -0.39
CLK3-224ENST00000568605 ACSL6Q9UKU0 697 aa12.62□□□□□ -0.39
CLK3-224ENST00000568605 POMT2Q9UKY4 750 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms