RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MC2RQ01718 297 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 DMPKQ09013 629 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 INSCQ1MX18 579 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 ZNF449Q6P9G9 518 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 UNC5AQ6ZN44 842 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 C11orf96Q7Z7L8 435 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 SLC9B2Q86UD5 537 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 AMZ2Q86W34 360 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 KCNMB4Q86W47 210 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 CILP2Q8IUL8 1156 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 RELL1Q8IUW5 271 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 IGDCC3Q8IVU1 814 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 OTUD6BQ8N6M0 293 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 IL22RA1Q8N6P7 574 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 GSDMBQ8TAX9 411 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 IFT81Q8WYA0 676 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 FMO2Q99518 471 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 DDA1Q9BW61 102 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 TSSK1BQ9BXA7 367 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 B3GNT4Q9C0J1 378 aa15.3■□□□□ 0.04
USB1-208ENST00000563207 LOC101059948A0A1B0GTJ6 334 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 OR2AG2A6NM03 316 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 PRMT5O14744 637 aaPredicted RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 SLC28A2O43868 658 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 KIF1CO43896 1103 aaKnown RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 SPAG6O75602 509 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 POP7O75817 140 aaKnown RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 FTH1P02794 183 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 SLC2A4P14672 509 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 ZNF28P17035 718 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 XRCC1P18887 633 aaPredicted RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 RPS3P23396 243 aaKnown RBP eCLIP15.29■□□□□ 0.042e-6■■□□□ 14.1
USB1-208ENST00000563207 CD82P27701 267 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 MAGEA4P43358 317 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CTSCP53634 463 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 PPP1CAP62136 330 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 SH3BP2P78314 561 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 ILF2Q12905 390 aaKnown RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 SEMA3AQ14563 771 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 HP1BP3Q5SSJ5 553 aaPredicted RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 DCAF12Q5T6F0 453 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 FAM83HQ6ZRV2 1179 aaPredicted RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 KIAA0408Q6ZU52 694 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 GALNT7Q86SF2 657 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CCDC25Q86WR0 208 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 ANKMY2Q8IV38 441 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CNTN4Q8IWV2 1026 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CACNA2D3Q8IZS8 1091 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 OR2L2Q8NH16 312 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 RSC1A1Q92681 617 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CERS2Q96G23 380 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 CFAP36Q96G28 342 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 ARHGAP9Q9BRR9 750 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 WDR83Q9BRX9 315 aaKnown RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 TRIM56Q9BRZ2 755 aaKnown RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 TRIM4Q9C037 500 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 MARCH4Q9P2E8 410 aaPredicted RBP15.29■□□□□ 0.04
USB1-208ENST00000563207 IL17BQ9UHF5 180 aa15.29■□□□□ 0.04
USB1-208ENST00000563207 KIR2DS5A0A0G2JLQ3 304 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 A0A0G2JNG1 304 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 MGAT4DA6NG13 374 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 OR5K4A6NMS3 321 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 PDZK1P1A8MUH7 402 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 H3BMM5 538 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 KIR2DS3K7RE56 304 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 NKX2-8O15522 239 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 SGTAO43765 313 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 ITGB2P05107 769 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 CARSP49589 748 aaKnown RBP15.28■□□□□ 0.04
USB1-208ENST00000563207 SEPHS1P49903 392 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 PLOD1Q02809 727 aaPredicted RBP15.28■□□□□ 0.04
USB1-208ENST00000563207 KIR2DS5Q14953 304 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 FASTKD3Q14CZ7 662 aaKnown RBP15.28■□□□□ 0.04
USB1-208ENST00000563207 HSP90AA5PQ58FG0 334 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 TEX35Q5T0J7 233 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 ATP1A1-AS1Q5TC04 95 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 ZNF470Q6ECI4 717 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 WASH2PQ6VEQ5 465 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 TMEM26Q6ZUK4 368 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 PRICKLE2Q7Z3G6 844 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 BEND7Q8N7W2 519 aaPredicted RBP15.28■□□□□ 0.04
USB1-208ENST00000563207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.28■□□□□ 0.043e-11■■■■■ 52.2
USB1-208ENST00000563207 TGM7Q96PF1 710 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 CCM2Q9BSQ5 444 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 WASH6PQ9NQA3 447 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 SIDT1Q9NXL6 827 aaKnown RBP15.28■□□□□ 0.04
USB1-208ENST00000563207 NSMCE4AQ9NXX6 385 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 MOCS1Q9NZB8 636 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 ACSL5Q9ULC5 683 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 COMMD10Q9Y6G5 202 aa15.28■□□□□ 0.04
USB1-208ENST00000563207 MN1Q10571 1320 aaPredicted RBP15.27■□□□□ 0.04
USB1-208ENST00000563207 GOLGA8KD6RF30 607 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 GOLGA8TH3BQL2 631 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 VIPP01282 170 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 ESR1P03372 595 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 IDSP22304 550 aa15.27■□□□□ 0.04
USB1-208ENST00000563207 ATP1A2P50993 1020 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms