RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ZNF749O43361 778 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 LDB2O43679 373 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 KRT86O43790 486 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 CEACAM4O75871 244 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 STK10O94804 968 aaKnown RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 APOC2P02655 101 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 CCDC175P0C221 793 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 RNF224P0DH78 156 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 PDHA2P29803 388 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 MC4RP32245 332 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ADRA1AP35348 466 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 SPARCL1Q14515 664 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ZRANB3Q5FWF4 1079 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ANKRD20A2Q5SQ80 823 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ANKRD20A1Q5TYW2 823 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 C1orf189Q5VU69 101 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ANKRD20A3Q5VUR7 823 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 MLIPQ5VWP3 458 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 SLC6A19Q695T7 634 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 DARS2Q6PI48 645 aaKnown RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 RANBP10Q6VN20 620 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 BBS12Q6ZW61 710 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 TAS2R42Q7RTR8 314 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 SNX20Q7Z614 316 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 TRIM73Q86UV7 250 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 AMIGO1Q86WK6 493 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 CDKL3Q8IVW4 592 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 GPR135Q8IZ08 494 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 SYCE1Q8N0S2 351 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 RBMXL3Q8N7X1 1067 aaKnown RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 TMEM102Q8N9M5 508 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 HEXDCQ8WVB3 486 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 KRT35Q92764 455 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 TRAPPC9Q96Q05 1148 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 TBL1YQ9BQ87 522 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 LACRTQ9GZZ8 138 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 VPS37BQ9H9H4 285 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 SYTL2Q9HCH5 934 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 IRAK4Q9NWZ3 460 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 ACTR10Q9NZ32 417 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 GPN3Q9UHW5 284 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-203ENST00000546881 PADI2Q9Y2J8 665 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 DUSP10Q9Y6W6 482 aa11.12□□□□□ -0.63
RAB5C-203ENST00000546881 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 CAPN1P07384 714 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 HBQ1P09105 142 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 PRSS56P0CW18 603 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 HADHAP40939 763 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 CDKN1CP49918 316 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 ZNF140P52738 457 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 EIF3EP60228 445 aaKnown RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 SLC9A5Q14940 896 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 DEFB110Q30KQ9 67 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 ZNF789Q5FWF6 425 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 CDHR3Q6ZTQ4 885 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 HPS6Q86YV9 775 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 Q8NA96 180 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 ACTL9Q8TC94 416 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 TFGQ92734 400 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 PNPLA2Q96AD5 504 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 C19orf60Q96EN9 201 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 PITPNM3Q9BZ71 974 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 TFB2MQ9H5Q4 396 aaKnown RBP11.11□□□□□ -0.63
RAB5C-203ENST00000546881 MVB12BQ9H7P6 319 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 ZDHHC3Q9NYG2 299 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 AMFRQ9UKV5 643 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 GUCA1BQ9UMX6 200 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 NBPF19A0A087WUL8 3843 aa11.11□□□□□ -0.63
RAB5C-203ENST00000546881 SPTAN1Q13813 2472 aaKnown RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 PEX12O00623 359 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 OR2B3O76000 313 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CBSLP0DN79 551 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 RBP3P10745 1247 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CBSP35520 551 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CETN2P41208 172 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 FOLR3P41439 243 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CCZ1BP86790 482 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CCZ1P86791 482 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 BRD3Q15059 726 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 NR6A1Q15406 480 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 GPR33Q49SQ1 333 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 SPESP1Q6UW49 350 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 PEX26Q7Z412 305 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 MRGPREQ86SM8 312 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 SERPINA9Q86WD7 417 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 ADGRF3Q8IZF5 1079 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 IQCKQ8N0W5 287 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CISD2Q8N5K1 135 aaKnown RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CLDN19Q8N6F1 224 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 C19orf47Q8N9M1 422 aaKnown RBP11.1□□□□□ -0.63
RAB5C-203ENST00000546881 GLIS1Q8NBF1 620 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 CLEC1AQ8NC01 280 aa11.1□□□□□ -0.63
RAB5C-203ENST00000546881 ALS2CR12Q96Q35 445 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms