RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TMEM192Q8IY95 271 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 VWA5B2Q8N398 1253 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 TSPEARQ8WU66 669 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 RHBDF1Q96CC6 855 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 REPS1Q96D71 796 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 FRMD6Q96NE9 622 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 TRAF4Q9BUZ4 470 aaPredicted RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 SLC22A4Q9H015 551 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 FAM83DQ9H4H8 585 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 WASH6PQ9NQA3 447 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 V9GYH0 126 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ANKRD28O15084 1053 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ERN1O75460 977 aaKnown RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 TNFRSF21O75509 655 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 WBP4O75554 376 aaKnown RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 SERPINI2O75830 405 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ALPPP05187 535 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 TKTL1P51854 596 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 HUNKP57058 714 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 HERVK_113P63132 956 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 FOXD4Q12950 439 aaPredicted RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 BAATQ14032 418 aaPredicted RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 KEAP1Q14145 624 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 SYPL2Q5VXT5 272 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 METTL2BQ6P1Q9 378 aaKnown RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 KIAA1324Q6UXG2 1013 aaKnown RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 LINC00469Q8N7U9 141 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 OR10Q1Q8NGQ4 319 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 GPR151Q8TDV0 419 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 NUDT8Q8WV74 236 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 CENPIQ92674 756 aaPredicted RBP12.56□□□□□ -0.4
HERC3-203ENST00000407637 DNASE1L2Q92874 299 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 FAM162AQ96A26 154 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 CYP2S1Q96SQ9 504 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 COPS4Q9BT78 406 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ERVK-6Q9BXR3 956 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 COA1Q9GZY4 146 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 NIPAL2Q9H841 368 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 SMURF1Q9HCE7 757 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ZC4H2Q9NQZ6 224 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ZNF224Q9NZL3 707 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 FZD10Q9ULW2 581 aa12.56□□□□□ -0.4
HERC3-203ENST00000407637 COL2A1P02458 1487 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 LINC00862A6NCI5 91 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 BTN3A3O00478 584 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 TOR1AO14656 332 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 EFNA1P20827 205 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 TIE1P35590 1138 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 GNPDA1P46926 289 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ATN1P54259 1190 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 GALEQ14376 348 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZNF79Q15937 498 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 DDR2Q16832 855 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 FNDC1Q4ZHG4 1894 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 SETMARQ53H47 684 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 XKR3Q5GH77 459 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 KIAA0319Q5VV43 1072 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 PKN3Q6P5Z2 889 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ARSKQ6UWY0 536 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 DLEU7Q6UYE1 221 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZPBP2Q6X784 338 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 CCDC71Q8IV32 467 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 CPA6Q8N4T0 437 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 PTGR2Q8N8N7 351 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 ASB15Q8WXK1 588 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 FCGR1BQ92637 280 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZDHHC15Q96MV8 337 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 TTLL2Q9BWV7 592 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 MRPL4Q9BYD3 311 aaKnown RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 C11orf54Q9H0W9 315 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 RNF121Q9H920 327 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 SCAF8Q9UPN6 1271 aaKnown RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 ERI2A8K979 691 aaKnown RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 NDUFA2O43678 99 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 KIAA0513O60268 411 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 MSCO60682 206 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ETV1P50549 477 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 CRISP3P54108 245 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZMYND11Q15326 602 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 GPR158Q5T848 1215 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZBTB37Q5TC79 503 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 HIPK1Q86Z02 1210 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 RDH10Q8IZV5 341 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZBTB44Q8NCP5 570 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 C2CD4AQ8NCU7 369 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 OR2T12Q8NG77 320 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 IPCEF1Q8WWN9 437 aaPredicted RBP12.55□□□□□ -0.4
HERC3-203ENST00000407637 FBXW5Q969U6 566 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 TESCQ96BS2 214 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 PTERQ96BW5 349 aa12.55□□□□□ -0.4
HERC3-203ENST00000407637 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms