RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 PNPT1Q8TCS8 783 aaKnown RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 FUBP1Q96AE4 644 aaKnown RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CIB1Q99828 191 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CCM2Q9BSQ5 444 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 PCDHGA11Q9Y5H2 935 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 SPACA6W5XKT8 324 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 ANXA6P08133 673 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 EPORP19235 508 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 PEX2P28328 305 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SPINT3P49223 89 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 UFM1P61960 85 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 DGKKQ5KSL6 1271 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 HERVK_113Q902F9 699 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 KXD1Q9BQD3 176 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CEP44Q9C0F1 390 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 FAM92AA1XBS5 289 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 HS6ST1O60243 411 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CBSLP0DN79 551 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 NCK1P16333 377 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CEBPBP17676 345 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CBSP35520 551 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 RAB30Q15771 203 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 PDE12Q6L8Q7 609 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 GALNT13Q8IUC8 556 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 WFDC5Q8TCV5 224 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SFXN1Q9H9B4 322 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 AASDHPPTQ9NRN7 309 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 LHX3Q9UBR4 397 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 MAPRE3Q9UPY8 281 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 FAM149AA5PLN7 773 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 HNMTP50135 292 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 MTPNP58546 118 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 GRB7Q14451 532 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SF1Q15637 639 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SLC13A3Q8WWT9 602 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SAMD11Q96NU1 681 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CD244Q9BZW8 370 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 HPS4Q9NQG7 708 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 ADPRHL2Q9NX46 363 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 ADGRE2Q9UHX3 823 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 DNAJC15Q9Y5T4 150 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 CFAP20Q9Y6A4 193 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 TRIP11Q15643 1979 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 PLXNB2O15031 1838 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 FAM234BA2RU67 622 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 HNRNPRO43390 633 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 GRID2O43424 1007 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 EIF2S1P05198 315 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 NKX3-2P78367 333 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 FOLH1Q04609 750 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 TNK2Q07912 1038 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 ASRGL1Q7L266 308 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 PAGE2Q7Z2X7 111 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 SYVN1Q86TM6 617 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 AADATQ8N5Z0 425 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 AIF1LQ9BQI0 150 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 NDRG2Q9UN36 371 aaKnown RBP13.75□□□□□ -0.21
SCAF4-202ENST00000399804 TMEM98Q9Y2Y6 226 aa13.75□□□□□ -0.21
SCAF4-202ENST00000399804 TRIM24O15164 1050 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 TSPAN6O43657 245 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PRPS2P11908 318 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 POU1F1P28069 291 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ANXA11P50995 505 aaKnown RBP13.74□□□□□ -0.21
SCAF4-202ENST00000399804 SLC30A9Q6PML9 568 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 SPESP1Q6UW49 350 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 GPR26Q8NDV2 337 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 OR10A6Q8NH74 314 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 GLYATL1Q969I3 302 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PPCDCQ96CD2 204 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 LRIG1Q96JA1 1093 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 FBXL12Q9NXK8 326 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 DNAJA2O60884 412 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ERAL1O75616 437 aaKnown RBP13.74□□□□□ -0.21
SCAF4-202ENST00000399804 G6PDP11413 515 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ACP5P13686 325 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 KELP23276 732 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PDK3Q15120 406 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 FRG2Q64ET8 278 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ADGRG2Q8IZP9 1017 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 FBXO27Q8NI29 283 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 OTUB1Q96FW1 271 aaPredicted RBP13.74□□□□□ -0.21
SCAF4-202ENST00000399804 FRG2BQ96QU4 278 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 AP4B1Q9Y6B7 739 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PI15O43692 258 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 IGLV3-27P01718 113 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 PFKLP17858 780 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 ARNTP27540 789 aa13.74□□□□□ -0.21
SCAF4-202ENST00000399804 BDKRB1P46663 353 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms