RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ZCWPW2A0A1B0GU75 182 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 MAGEB16A2A368 324 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 OR6C74A6NCV1 312 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 B4E171 279 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 PFDN6O15212 129 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 NVLO15381 856 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 USP1O94782 785 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 APOA4P06727 396 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 PGAM1P18669 254 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 RPS3P23396 243 aaKnown RBP eCLIP11.51□□□□□ -0.576e-7■□□□□ 11.3
RAB5C-204ENST00000547517 IVDP26440 423 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 FMO4P31512 558 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 TSPAN7P41732 249 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 RAB15P59190 212 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 MRPS25P82663 173 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 TLE3Q04726 772 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 PRKG2Q13237 762 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CLN3Q13286 438 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 MORF4L2Q15014 288 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 BBS9Q3SYG4 887 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 DNAJC21Q5F1R6 531 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CTSL3PQ5NE16 218 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 DNTTIP2Q5QJE6 756 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CACHD1Q5VU97 1274 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 ANKS6Q68DC2 871 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 NEPROQ6NW34 567 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 ARMC6Q6NXE6 501 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 TMEM135Q86UB9 458 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 LRRC6Q86X45 466 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 ZFAND4Q86XD8 727 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CILP2Q8IUL8 1156 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 VRK3Q8IV63 474 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 BMPERQ8N8U9 685 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 OR4E2Q8NGC2 313 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 OR52E1Q8NGJ3 308 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 ZFPM2Q8WW38 1151 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 LCN9Q8WX39 176 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 LPGAT1Q92604 370 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 FAM136AQ96C01 138 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 SIGLEC10Q96LC7 697 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 PANX3Q96QZ0 392 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 TAAR9Q96RI9 348 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 NRTNQ99748 197 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CTRCQ99895 268 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 DDA1Q9BW61 102 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 RAB33BQ9H082 229 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 SRMSQ9H3Y6 488 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 ZNF768Q9H5H4 540 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 C20orf96Q9NUD7 363 aaPredicted RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 EPHA6Q9UF33 1036 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 CRYL1Q9Y2S2 319 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 B3GALT1Q9Y5Z6 326 aa11.51□□□□□ -0.57
RAB5C-204ENST00000547517 URB1O60287 2271 aaKnown RBP11.51□□□□□ -0.57
RAB5C-204ENST00000547517 GSAPA4D1B5 854 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 TOX3O15405 576 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 NIPSNAP2O75323 286 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 LIPCP11150 499 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 POLR2CP19387 275 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 ACADLP28330 430 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SLC1A2P43004 574 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 ITGA8P53708 1063 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SH3BP2P78314 561 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 PLOD1Q02809 727 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 FOXM1Q08050 763 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 PRKAA1Q13131 559 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 CRYMQ14894 314 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 TGIF1Q15583 401 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 LONRF1Q17RB8 773 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 MSS51Q4VC12 460 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 DCAF12Q5T6F0 453 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 BROXQ5VW32 411 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 CENPUQ71F23 418 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 DENND6AQ8IWF6 608 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SLC22A15Q8IZD6 547 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SPATA4Q8NEY3 305 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 ASZ1Q8WWH4 475 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SNF8Q96H20 258 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 PWWP2AQ96N64 755 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 MAP3K3Q99759 626 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 DPH1Q9BZG8 443 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 TRIT1Q9H3H1 467 aaKnown RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 XKR8Q9H6D3 395 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 APMAPQ9HDC9 416 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 FBXO6Q9NRD1 293 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 SIDT1Q9NXL6 827 aaKnown RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 TSR3Q9UJK0 312 aaKnown RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 ACSL6Q9UKU0 697 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 PLAGL1Q9UM63 463 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 CDYLQ9Y232 598 aa11.5□□□□□ -0.57
RAB5C-204ENST00000547517 TDRKHQ9Y2W6 561 aaKnown RBP11.5□□□□□ -0.57
RAB5C-204ENST00000547517 PCDHGA3Q9Y5H0 932 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms