RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 INIPQ9NRY2 104 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 FAM118AQ9NWS6 357 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 GALPQ9UBC7 116 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 WARS2Q9UGM6 360 aaKnown RBP11.29□□□□□ -0.6
DDB1-224ENST00000545894 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 CHD7Q9P2D1 2997 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 IGLV3-10A0A075B6K4 115 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 G3V2T6 193 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ARNTLO00327 626 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ADAM12O43184 909 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 RAMP2O60895 175 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 NDUFS3O75489 264 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 OR4F21O95013 312 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 URODP06132 367 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 NFKBIAP25963 317 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 GSTM4Q03013 218 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ZNF235Q14590 738 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 CTXN3Q4LDR2 81 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
DDB1-224ENST00000545894 C6orf141Q5SZD1 244 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 PLPP4Q5VZY2 271 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 Q6ZSR9 355 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 NCCRP1Q6ZVX7 275 aaPredicted RBP11.29□□□□□ -0.6
DDB1-224ENST00000545894 MON1AQ86VX9 555 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 CDYL2Q8N8U2 506 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ABHD11Q8NFV4 315 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 SGCDQ92629 289 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 ZNF347Q96SE7 839 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
DDB1-224ENST00000545894 TRNAU1APQ9NX07 287 aaKnown RBP11.29□□□□□ -0.6
DDB1-224ENST00000545894 MTRRQ9UBK8 725 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 PCDHGA8Q9Y5G5 932 aa11.29□□□□□ -0.6
DDB1-224ENST00000545894 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 H7C4K7 107 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 MUSKO15146 869 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 ADAM23O75077 832 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 SERINC3Q13530 473 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 PWP1Q13610 501 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 ZNF846Q147U1 533 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 SPCS2Q15005 226 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 TRIM16LQ309B1 348 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 PARP15Q460N3 678 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 SULT1C3Q6IMI6 304 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 FBXL22Q6P050 247 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 AFTPHQ6ULP2 937 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CRTC3Q6UUV7 619 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 FKBP9P1Q75LS8 142 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 TMCO5AQ8N6Q1 288 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CHDHQ8NE62 594 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 IGSF8Q969P0 613 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 FKBP10Q96AY3 582 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CCDC115Q96NT0 180 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 ZNF382Q96SR6 550 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 OSBPL10Q9BXB5 764 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 TMEM165Q9HC07 324 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 NLE1Q9NVX2 485 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 SMPD4Q9NXE4 827 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 DNAJB9Q9UBS3 223 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 EIF2B4Q9UI10 523 aaKnown RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 BACE2Q9Y5Z0 518 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CLDN25C9JDP6 229 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 IFRD1O00458 451 aaPredicted RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 E2F3O00716 465 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 DNAJB5O75953 348 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 NDST3O95803 873 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 HTR1AP08908 422 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 OR4Q2P0C623 313 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 JAK1P23458 1154 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CA8P35219 290 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 OPRL1P41146 370 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 OCA2Q04671 838 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 AQP6Q13520 282 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 GRIN2CQ14957 1233 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CYP2A13Q16696 494 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 GPSM1Q86YR5 675 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
DDB1-224ENST00000545894 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 OR8J3Q8NGG0 315 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 MUL1Q969V5 352 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 ESAMQ96AP7 390 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 MBOAT4Q96T53 435 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 SMURF2Q9HAU4 748 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 USE1Q9NZ43 259 aa11.28□□□□□ -0.6
DDB1-224ENST00000545894 CD274Q9NZQ7 290 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms