RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 UBXN4Q92575 508 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 TCTN2Q96GX1 697 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 DNAJC1Q96KC8 554 aaKnown RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PPM1MQ96MI6 270 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 NRTNQ99748 197 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 GPR87Q9BY21 358 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ING2Q9H160 280 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 AKIRIN1Q9H9L7 192 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 PDE7BQ9NP56 450 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 SLAMF7Q9NQ25 335 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 HRASLS2Q9NWW9 162 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 SLC24A2Q9UI40 661 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 CRLS1Q9UJA2 301 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ERRFI1Q9UJM3 462 aaPredicted RBP11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ACSL5Q9ULC5 683 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 ZNF451Q9Y4E5 1061 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 LRBAP50851 2863 aa11.55□□□□□ -0.56
GABPB1-206ENST00000543881 OR6C74A6NCV1 312 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 FTCDO95954 541 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 LDLRP01130 860 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 ATP1B2P14415 290 aaPredicted RBP11.54□□□□□ -0.56
GABPB1-206ENST00000543881 TPH1P17752 444 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 ARCN1P48444 511 aaKnown RBP11.54□□□□□ -0.56
GABPB1-206ENST00000543881 PRLHRP49683 370 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 GDF10P55107 478 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 TUBB3Q13509 450 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 IL10RAQ13651 578 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 CYB5D1Q6P9G0 228 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 KLHL35Q6PF15 583 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 FBXO38Q6PIJ6 1188 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 SNX20Q7Z614 316 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 SYVN1Q86TM6 617 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 Q8NA96 180 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 SIDT2Q8NBJ9 832 aaKnown RBP11.54□□□□□ -0.56
GABPB1-206ENST00000543881 COPS8Q99627 209 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 BAG1Q99933 345 aaPredicted RBP11.54□□□□□ -0.56
GABPB1-206ENST00000543881 C19orf43Q9BQ61 176 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 DESI2Q9BSY9 194 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 MFRPQ9BY79 579 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 KIR3DX1Q9H7L2 352 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 AMFRQ9UKV5 643 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 SRPK3Q9UPE1 567 aa11.54□□□□□ -0.56
GABPB1-206ENST00000543881 PRRC2CQ9Y520 2896 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 IGLV3-16A0A075B6K0 115 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 TRBV5-4A0A0C4DH59 114 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 TLCD2A6NGC4 264 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 DPM1O60762 260 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 SLC35G4P0C7Q5 338 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 ITGALP20701 1170 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 VARSP26640 1264 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 MC4RP32245 332 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 HADHAP40939 763 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 CETN2P41208 172 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 RPS15P62841 145 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PDE1BQ01064 536 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PARP6Q2NL67 630 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PEX26Q7Z412 305 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 SRRM1Q8IYB3 904 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PIANPQ8IYJ0 282 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 D2HGDHQ8N465 521 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 TAB3Q8N5C8 712 aaPredicted RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 SLC35B2Q8TB61 432 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 HM13Q8TCT9 377 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 ZFPM2Q8WW38 1151 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 ULK4Q96C45 1275 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 DCUN1D1Q96GG9 259 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 CD180Q99467 661 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 FGF21Q9NSA1 209 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PIH1D1Q9NWS0 290 aaKnown RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 FEZ2Q9UHY8 353 aaPredicted RBP11.53□□□□□ -0.56
GABPB1-206ENST00000543881 RARRES3Q9UL19 164 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 PCDHGB7Q9Y5F8 929 aa11.53□□□□□ -0.56
GABPB1-206ENST00000543881 KLHL33A6NCF5 533 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 H7C0S8 307 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 RALBP11234 206 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 POLR2CP19387 275 aaPredicted RBP11.52□□□□□ -0.56
GABPB1-206ENST00000543881 ACRV1P26436 265 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 PDHA2P29803 388 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 PTGIRP43119 386 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 HSD11B2P80365 405 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 LAMB3Q13751 1172 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 GSE1Q14687 1217 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 POU6F1Q14863 301 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 GPR19Q15760 415 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 GPR33Q49SQ1 333 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 SLC6A19Q695T7 634 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 SERPINA9Q86WD7 417 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 OOSP2Q86WS3 158 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 KMT5CQ86Y97 462 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 CLDN19Q8N6F1 224 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 TTC13Q8NBP0 860 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 OR4E2Q8NGC2 313 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 FCRL4Q96PJ5 515 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 PPP1R2P1Q96PQ5 205 aa11.52□□□□□ -0.56
GABPB1-206ENST00000543881 CCM2Q9BSQ5 444 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms