RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 D6RAR5 112 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 B4GAT1O43505 415 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 DUX1O43812 170 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 CPNE6O95741 557 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 RPN2P04844 631 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 ALDH4A1P30038 563 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 SKIV2L2P42285 1042 aaKnown RBP18.95■□□□□ 0.62
DDX55-207ENST00000540763 CCL7P80098 99 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 GPR18Q14330 331 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 BRD3Q15059 726 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 LRRC8EQ6NSJ5 796 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 UNC5DQ6UXZ4 953 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 RBM44Q6ZP01 1051 aaKnown RBP18.95■□□□□ 0.62
DDX55-207ENST00000540763 NEK10Q6ZWH5 1172 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 STRA8Q7Z7C7 330 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 ZC3HC1Q86WB0 502 aaKnown RBP18.95■□□□□ 0.62
DDX55-207ENST00000540763 TBC1D21Q8IYX1 336 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 DCBLD1Q8N8Z6 715 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 ACVR1CQ8NER5 493 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 DEPDC7Q96QD5 511 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 RHOJQ9H4E5 214 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 SMYD2Q9NRG4 433 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 TXNDC16Q9P2K2 825 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 SLC17A6Q9P2U8 582 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 PSAT1Q9Y617 370 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 CFAP20Q9Y6A4 193 aaKnown RBP18.95■□□□□ 0.62
DDX55-207ENST00000540763 CFAP47Q6ZTR5 3102 aa18.95■□□□□ 0.62
DDX55-207ENST00000540763 MT-CO3P00414 261 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 PROS1P07225 676 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 F7P08709 466 aaPredicted RBP18.94■□□□□ 0.62
DDX55-207ENST00000540763 CBSLP0DN79 551 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 ENO3P13929 434 aaPredicted RBP18.94■□□□□ 0.62
DDX55-207ENST00000540763 CD1CP29017 333 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 CBSP35520 551 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 GP5P40197 560 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 MAPK9P45984 424 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 OR1D5P58170 312 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 FOXC1Q12948 553 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 KYNUQ16719 465 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 KBTBD12Q3ZCT8 623 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 DUS1LQ6P1R4 473 aaKnown RBP18.94■□□□□ 0.62
DDX55-207ENST00000540763 NAPRTQ6XQN6 538 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 VRK3Q8IV63 474 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 CHCHD4Q8N4Q1 142 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 Q8N9G6 341 aaPredicted RBP18.94■□□□□ 0.62
DDX55-207ENST00000540763 OR5K2Q8NHB8 316 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 CD200R1Q8TD46 325 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 FBF1Q8TES7 1133 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 INPP5DQ92835 1189 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 ANKZF1Q9H8Y5 726 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 POLG2Q9UHN1 485 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 SLC24A2Q9UI40 661 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 CLCA2Q9UQC9 943 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 ASF1AQ9Y294 204 aa18.94■□□□□ 0.62
DDX55-207ENST00000540763 FAM208BQ5VWN6 2430 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 TMX2-CTNND1H3BSU7 103 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 KDM1AO60341 852 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 KRT33BQ14525 404 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 KLHL35Q6PF15 583 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 WDR74Q6RFH5 385 aaPredicted RBP18.93■□□□□ 0.62
DDX55-207ENST00000540763 TRMT10CQ7L0Y3 403 aaKnown RBP18.93■□□□□ 0.62
DDX55-207ENST00000540763 AHCYL2Q96HN2 611 aaKnown RBP18.93■□□□□ 0.62
DDX55-207ENST00000540763 TMEM74Q96NL1 305 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 FERD3LQ96RJ6 166 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 GPR21Q99679 349 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 RAB33BQ9H082 229 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 TRIT1Q9H3H1 467 aaKnown RBP18.93■□□□□ 0.62
DDX55-207ENST00000540763 ACSS3Q9H6R3 686 aa18.93■□□□□ 0.62
DDX55-207ENST00000540763 TRMT6Q9UJA5 497 aaKnown RBP18.93■□□□□ 0.62
DDX55-207ENST00000540763 IGF2RP11717 2491 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 CXorf49A8MYA2 514 aaPredicted RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 HYAL3O43820 417 aaPredicted RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 UBXN7O94888 489 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 MATN4O95460 622 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 ABHD2P08910 425 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 MPC1LP0DKB6 136 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 FDXRP22570 491 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 CCKBRP32239 447 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 PLCL1Q15111 1095 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 MAP9Q49MG5 647 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 RBM20Q5T481 1227 aaKnown RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 HECTD2Q5U5R9 776 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 PIM3Q86V86 326 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 ZNF761Q86XN6 746 aaPredicted RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 DCUN1D3Q8IWE4 304 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 GPATCH11Q8N954 259 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 SIDT2Q8NBJ9 832 aaKnown RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 OR4D9Q8NGE8 314 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 GIMAP7Q8NHV1 300 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 VPS39Q96JC1 886 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 FOPNLQ96NB1 174 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 CYTH2Q99418 400 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 NDNQ99608 321 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 RBBP8Q99708 897 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 TBC1D10AQ9BXI6 508 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 TFB2MQ9H5Q4 396 aaKnown RBP18.92■□□□□ 0.62
DDX55-207ENST00000540763 SYNDIG1Q9H7V2 258 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 GALPQ9UBC7 116 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 VWA7Q9Y334 891 aa18.92■□□□□ 0.62
DDX55-207ENST00000540763 NEUROG3Q9Y4Z2 214 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms