RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 ABCG1P45844 678 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ITGA8P53708 1063 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 RAB15P59190 212 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 PLOD1Q02809 727 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 HSPA14Q0VDF9 509 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 THOC5Q13769 683 aaKnown RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 TMED2Q15363 201 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 LONRF1Q17RB8 773 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 NEPROQ6NW34 567 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 LRRC69Q6ZNQ3 347 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 FAM92BQ6ZTR7 304 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 CENPUQ71F23 418 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SDCCAG8Q86SQ7 713 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SLC22A15Q8IZD6 547 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 BMPERQ8N8U9 685 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 OR52E1Q8NGJ3 308 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 OR5AR1Q8NGP9 310 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ASZ1Q8WWH4 475 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 USP7Q93009 1102 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ART4Q93070 314 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 PANX3Q96QZ0 392 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 FERD3LQ96RJ6 166 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 TCF12Q99081 682 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 MVB12BQ9H7P6 319 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 INTS10Q9NVR2 710 aaKnown RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 OCIAD1Q9NX40 245 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 SIDT1Q9NXL6 827 aaKnown RBP12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ACSL6Q9UKU0 697 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 CDYLQ9Y232 598 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ASF1AQ9Y294 204 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 VPS9D1Q9Y2B5 631 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
COL5A1-206ENST00000465877 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 SMG1Q96Q15 3661 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ATMQ13315 3056 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 TLCD2A6NGC4 264 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 EFCAB8A8MWE9 144 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 B4E171 279 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 NVLO15381 856 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 TOX3O15405 576 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 RAD51CO43502 376 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 KIF1CO43896 1103 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 NIPSNAP2O75323 286 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 GPC4O75487 556 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ESR1P03372 595 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 APOA4P06727 396 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 F7P08709 466 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ITPKBP27987 946 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ACADLP28330 430 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 TSPAN7P41732 249 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 RPL21P46778 160 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ADARP55265 1226 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 MRPS25P82663 173 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 HIF1AQ16665 826 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 BBS9Q3SYG4 887 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 DNTTIP2Q5QJE6 756 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 CACHD1Q5VU97 1274 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 VRK3Q8IV63 474 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 DENND6AQ8IWF6 608 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 OR5K2Q8NHB8 316 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ZDHHC12Q96GR4 267 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 BIRC8Q96P09 236 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 CD180Q99467 661 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 EBNA1BP2Q99848 306 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 WDR83Q9BRX9 315 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 DDA1Q9BW61 102 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 TRIT1Q9H3H1 467 aaKnown RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 FBXO6Q9NRD1 293 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 C20orf96Q9NUD7 363 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-206ENST00000465877 HRASLS2Q9NWW9 162 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 ICKQ9UPZ9 632 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 CHMP2BQ9UQN3 213 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
COL5A1-206ENST00000465877 MGAQ8IWI9 3026 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 BHMG1C9JSJ3 638 aaPredicted RBP12.54□□□□□ -0.4
COL5A1-206ENST00000465877 MATN2O00339 956 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 BTN3A1O00481 513 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 NDC80O14777 642 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TP73O15350 636 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 KRT37O76014 449 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TTC4O95801 387 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 LIPCP11150 499 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 CD82P27701 267 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 AOAHP28039 575 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 FMO4P31512 558 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 SEPHS1P49903 392 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 TLE3Q04726 772 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 PRKAA1Q13131 559 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 PRKG2Q13237 762 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 CLN3Q13286 438 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 CTBP1Q13363 440 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 COL28A1Q2UY09 1125 aa12.54□□□□□ -0.4
COL5A1-206ENST00000465877 HSP90AA5PQ58FG0 334 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms