RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CXorf40BQ96DE9 158 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 SLC32A1Q9H598 525 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 KCNK13Q9HB14 408 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 GSRP00390 522 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 HPCAP84074 193 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 NFKB2Q00653 900 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 ZCCHC8Q6NZY4 707 aaKnown RBP13.78□□□□□ -0.2
SCAF4-202ENST00000399804 CRTC1Q6UUV9 634 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 BEND7Q8N7W2 519 aaPredicted RBP13.78□□□□□ -0.2
SCAF4-202ENST00000399804 ITCHQ96J02 903 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 SORT1Q99523 831 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 PTGDR2Q9Y5Y4 395 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 HCFC2Q9Y5Z7 792 aa13.78□□□□□ -0.2
SCAF4-202ENST00000399804 MAP3K13O43283 966 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 RECQL5O94762 991 aaPredicted RBP13.77□□□□□ -0.2
SCAF4-202ENST00000399804 CTSEP14091 401 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 KCNA5P22460 613 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 HLA-FP30511 346 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 PREPP48147 710 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 NEK2P51955 445 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 DIO3P55073 304 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 TGM3Q08188 693 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 TP53BP2Q13625 1128 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 HERC3Q15034 1050 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 AMZ2Q86W34 360 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 KDM1BQ8NB78 822 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 SMARCD2Q92925 531 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 RAD51AP1Q96B01 352 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 BBS4Q96RK4 519 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 EBPLQ9BY08 206 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 RIMKLBQ9ULI2 386 aa13.77□□□□□ -0.2
SCAF4-202ENST00000399804 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
SCAF4-202ENST00000399804 MT-ND1P03886 318 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 T-ENOLP0DO92 83 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ACRV1P26436 265 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 RAD23AP54725 363 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 GLYATQ6IB77 296 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 TLDC1Q6P9B6 456 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 MIPEPQ99797 713 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 C1orf21Q9H246 121 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 SYNDIG1Q9H7V2 258 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-202ENST00000399804 AP3M1Q9Y2T2 418 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 AK5Q9Y6K8 562 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 NPIPB15A6NHN6 443 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-202ENST00000399804 E7ENX8 843 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 MAPK9P45984 424 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 RFX3P48380 749 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 AP1S2P56377 157 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 UBE3AQ05086 875 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 SEMA3AQ14563 771 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF648Q5T619 568 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-202ENST00000399804 CYP20A1Q6UW02 462 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 CPXM2Q8N436 756 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 DHRSXQ8N5I4 330 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 WBP2Q969T9 261 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ROPN1LQ96C74 230 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF514Q96K75 400 aaPredicted RBP13.77□□□□□ -0.21
SCAF4-202ENST00000399804 QRFPRQ96P65 431 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 CCDC3Q9BQI4 270 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 SLC2A11Q9BYW1 496 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
SCAF4-202ENST00000399804 ANXA4P09525 319 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF140P52738 457 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 DLG1Q12959 904 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 P3H2Q8IVL5 708 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 SLC7A5P2Q9GIP4 190 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 ALG2Q9H553 416 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CCDC177Q9NQR7 707 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 FBXL21Q9UKT6 434 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 PPM1HQ9ULR3 514 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CCL26Q9Y258 94 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 EFNA1P20827 205 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 DGKQP52824 942 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 SH3BP2P78314 561 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 TMEM115Q12893 351 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CYP2U1Q7Z449 544 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 EID3Q8N140 333 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 ZNF513Q8N8E2 541 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 GPR150Q8NGU9 434 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 NELL1Q92832 810 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 RNF11Q9Y3C5 154 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 PRKAB1Q9Y478 270 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 IFNA14P01570 189 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 IDSP22304 550 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 PRKAG1P54619 331 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 PTPN5P54829 565 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 RPS14P62263 151 aaKnown RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 MTX3Q5HYI7 312 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CPTPQ5TA50 214 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 CXorf57Q6NSI4 855 aaKnown RBP13.76□□□□□ -0.21
SCAF4-202ENST00000399804 OR2T34Q8NGX1 318 aa13.76□□□□□ -0.21
SCAF4-202ENST00000399804 OR2T3Q8NH03 318 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms