RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 MUS81Q96NY9 551 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 FYTTD1Q96QD9 318 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 DPCDQ9BVM2 203 aaPredicted RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 LSG1Q9H089 658 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 PPIL3Q9H2H8 161 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 SLC6A15Q9H2J7 730 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 METTL7AQ9H8H3 244 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 KLHL1Q9NR64 748 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 NLKQ9UBE8 527 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 CHRNA9Q9UGM1 479 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 MRPS2Q9Y399 296 aaKnown RBP4.87□□□□□ -1.63
GABPB1-204ENST00000396464 FAM96BQ9Y3D0 163 aa4.87□□□□□ -1.63
GABPB1-204ENST00000396464 A0A0U1RQJ8 604 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 LOC100653049A0A140TA62 436 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 KLRF2D3W0D1 207 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 K7EQM0 130 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 MEIS2O14770 477 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 MAPK13O15264 365 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 NVLO15381 856 aaKnown RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CREG1O75629 220 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 KRT34O76011 436 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 STC2O76061 302 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 RHOBTB1O94844 696 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SUN1O94901 812 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 MFN2O95140 757 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CBX6O95503 412 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 IL1BP01584 269 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 ERBB2P04626 1255 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CCDC172P0C7W6 258 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 UBTFL6P0CB48 400 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 HOXD9P28356 352 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 PTGS2P35354 604 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CAPGP40121 348 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 GMPSP49915 693 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 GPR143P51810 404 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CLDN2P57739 230 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SIRPAP78324 504 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 FOLH1Q04609 750 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 DNASE1L3Q13609 305 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 CSRP2Q16527 193 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 C9orf50Q5SZB4 431 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SFRP4Q6FHJ7 346 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 LAIR1Q6GTX8 287 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SLC39A5Q6ZMH5 540 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 QSOX2Q6ZRP7 698 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 TMPRSS9Q7Z410 1059 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 TMCO2Q7Z6W1 182 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SPATA24Q86W54 205 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 ADGRF3Q8IZF5 1079 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 OR52B4Q8NGK2 314 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 OR14L1PQ8NHC6 308 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 TAS1R2Q8TE23 839 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 TFAP2CQ92754 450 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 NT5C3BQ969T7 300 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 MARS2Q96GW9 593 aaKnown RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 VCPIP1Q96JH7 1222 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 ZNF607Q96SK3 696 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 GPR87Q9BY21 358 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 UBQLN3Q9H347 655 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SLC28A3Q9HAS3 691 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 KCNMB3Q9NPA1 279 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 SLCO1C1Q9NYB5 712 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 ANKFY1Q9P2R3 1169 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 ASTN2O75129 1339 aaPredicted RBP4.86□□□□□ -1.63
GABPB1-204ENST00000396464 IL16Q14005 1332 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 RNF123Q5XPI4 1314 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 PHLPP2Q6ZVD8 1323 aa4.86□□□□□ -1.63
GABPB1-204ENST00000396464 NCAPD2Q15021 1401 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 C1orf226A1L170 272 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 E9PI62 339 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 LGALS8O00214 317 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 NDUFS8O00217 210 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PSMD9O00233 223 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PRRG1O14668 218 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 DSCR3O14972 297 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 SPRY2O43597 315 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 TBX19O60806 448 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 B4GALT2O60909 372 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 FCGR3BO75015 233 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ATG13O75143 517 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PGLSO95336 258 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 YEATS4O95619 227 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 YES1P07947 543 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ALDOCP09972 364 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 RPA2P15927 270 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 HOXB9P17482 250 aaPredicted RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 EEF1B2P24534 225 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ACAT1P24752 427 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 ITGB8P26012 769 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PSMB4P28070 264 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 BMI1P35226 326 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 LONP1P36776 959 aaKnown RBP4.85□□□□□ -1.63
GABPB1-204ENST00000396464 USP8P40818 1118 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 MAGEB1P43366 347 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 MMP13P45452 471 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 NR2C2P49116 596 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 SCNN1GP51170 649 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 PRMT2P55345 433 aa4.85□□□□□ -1.63
GABPB1-204ENST00000396464 SLC37A1P57057 533 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms