RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MYBPC3Q14896 1274 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 TGFBIQ15582 683 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 PPP1R3AQ16821 1122 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 ARL13AQ5H913 290 aaPredicted RBP11.83□□□□□ -0.51
USF1-203ENST00000368021 ZNF678Q5SXM1 525 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 SBSNQ6UWP8 590 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 CYHR1Q6ZMK1 362 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 FRMD7Q6ZUT3 714 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 NEK10Q6ZWH5 1172 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 GPSM1Q86YR5 675 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 KIRREL3Q8IZU9 778 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 SDR16C5Q8N3Y7 309 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 CCNYL1Q8N7R7 359 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 OR14C36Q8NHC7 312 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 ASZ1Q8WWH4 475 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 COX14Q96I36 57 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 HIC2Q96JB3 615 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 PHOX2BQ99453 314 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 IER2Q9BTL4 223 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 C1QTNF3Q9BXJ4 246 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 FAM126AQ9BYI3 521 aaPredicted RBP11.83□□□□□ -0.51
USF1-203ENST00000368021 SLC6A17Q9H1V8 727 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 STN1Q9H668 368 aaKnown RBP11.83□□□□□ -0.51
USF1-203ENST00000368021 EML4Q9HC35 981 aaKnown RBP11.83□□□□□ -0.51
USF1-203ENST00000368021 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 FBXO4Q9UKT5 387 aa11.83□□□□□ -0.51
USF1-203ENST00000368021 ZFR2Q9UPR6 939 aaKnown RBP11.83□□□□□ -0.51
USF1-203ENST00000368021 A0A0G2JND7 137 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 OR2AG2A6NM03 316 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 SUPT3HB4E1H0 165 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 DIAPH2O60879 1101 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 SUPT3HO75486 399 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 GPC4O75487 556 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 CDK14O94921 469 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 SLCO2B1O94956 709 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 NQO1P15559 274 aaKnown RBP11.83□□□□□ -0.52
USF1-203ENST00000368021 ALOX15P16050 662 aaPredicted RBP11.83□□□□□ -0.52
USF1-203ENST00000368021 NDUFV2P19404 249 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 TRIM23P36406 574 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 FNTBP49356 437 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 ARFIP2P53365 341 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 CTSCP53634 463 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 ALDH18A1P54886 795 aaKnown RBP11.83□□□□□ -0.52
USF1-203ENST00000368021 SF3A3Q12874 501 aaKnown RBP eCLIP11.83□□□□□ -0.523e-6■■■■□ 23.4
USF1-203ENST00000368021 PFKFB4Q16877 469 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 WSCD2Q2TBF2 565 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 SEL1L3Q68CR1 1132 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 ADGRG6Q86SQ4 1221 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 HORMAD1Q86X24 394 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 LSMEM2Q8N112 164 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 FBXO39Q8N4B4 442 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 PTGR2Q8N8N7 351 aaPredicted RBP11.83□□□□□ -0.52
USF1-203ENST00000368021 TSTD1Q8NFU3 115 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 RFWD2Q8NHY2 731 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 ASB12Q8WXK4 309 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 LINC00615Q96LM1 132 aaPredicted RBP11.83□□□□□ -0.52
USF1-203ENST00000368021 C1QTNF7Q9BXJ2 289 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 RDH14Q9HBH5 336 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 CYP4F12Q9HCS2 524 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 NUDT4Q9NZJ9 180 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 GPR34Q9UPC5 381 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 OARD1Q9Y530 152 aa11.83□□□□□ -0.52
USF1-203ENST00000368021 TCRBV21S2A2A0A5A6 115 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 GPR89AB7ZAQ6 455 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 SLCO1B7G3V0H7 640 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 CHRNGP07510 517 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 GPR89BP0CG08 455 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 MPC1LP0DKB6 136 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 DGKEP52429 567 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 NHLH1Q02575 133 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 HSPA14Q0VDF9 509 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 SRSF5Q13243 272 aaKnown RBP11.82□□□□□ -0.52
USF1-203ENST00000368021 SGCGQ13326 291 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 MAP7Q14244 749 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 GSTA3Q16772 222 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 CDKL4Q5MAI5 379 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 ZNF648Q5T619 568 aaPredicted RBP11.82□□□□□ -0.52
USF1-203ENST00000368021 TMEM220Q6QAJ8 160 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 FRA10AC1Q70Z53 315 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 TRPM8Q7Z2W7 1104 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 PGBD3Q8N328 593 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 ZNF781Q8N8C0 355 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 PLA2G15Q8NCC3 412 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 PDPRQ8NCN5 879 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 HMGB4Q8WW32 186 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 ELMO1Q92556 727 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 EXT2Q93063 718 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 CCM2Q9BSQ5 444 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 TPSD1Q9BZJ3 242 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 KCNH6Q9H252 994 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 GSTO2Q9H4Y5 243 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 POLMQ9NP87 494 aaPredicted RBP11.82□□□□□ -0.52
USF1-203ENST00000368021 MARCOQ9UEW3 520 aaPredicted RBP11.82□□□□□ -0.52
USF1-203ENST00000368021 CDYLQ9Y232 598 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 INVSQ9Y283 1065 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 TMED5Q9Y3A6 229 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 COMMD3-BMI1R4GMX3 469 aa11.82□□□□□ -0.52
USF1-203ENST00000368021 C17orf113A0A1B0GUU1 675 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms