RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LUMP51884 338 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 RPA4Q13156 261 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF311Q5JNZ3 666 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 PHF19Q5T6S3 580 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 CHST9Q7L1S5 443 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 CUZD1Q86UP6 607 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 KELP23276 732 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 CXCR1P25024 350 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 ADCYAP1R1P41586 468 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 CDKN1CP49918 316 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-201ENST00000331920 TMEM86AQ8N2M4 240 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 FIBCD1Q8N539 461 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OR2T34Q8NGX1 318 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OR2T3Q8NH03 318 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 OSBPL2Q9H1P3 480 aa16.18■□□□□ 0.18
PTCH1-201ENST00000331920 A8MUI8 341 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 SFTPBP07988 381 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 GNRHRP30968 328 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PER3P56645 1201 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 LDB1Q86U70 411 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CPA6Q8N4T0 437 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TRMT61BQ9BVS5 477 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PAK6Q9NQU5 681 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 MYH8P13535 1937 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CAPN8A6NHC0 703 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 EPHX1P07099 455 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 SLC35G6P0C7Q6 338 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 MAPK8P45983 427 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF143P52747 638 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 ERVK-21P61565 698 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 UBXN11Q5T124 520 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 NXPE1Q8N323 547 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CPSF7Q8N684 471 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TMEM145Q8NBT3 493 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 NR2E3Q9Y5X4 410 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TNFSF12O43508 249 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PRAMEF12O95522 483 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 ANXA4P09525 319 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PRPF38BQ5VTL8 546 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 C12orf29Q8N999 325 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CIDECQ96AQ7 238 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 GAS2L1Q99501 681 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 GABRR2P28476 465 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 RNF220Q5VTB9 566 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 IL1RAPQ9NPH3 570 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 ADARB2Q9NS39 739 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TMEM51Q9NW97 253 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CLDN9O95484 217 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TPTEP56180 551 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 USP43Q70EL4 1123 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 HID1Q8IV36 788 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 SCGB3A2Q96PL1 93 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 DNAAF2Q9NVR5 837 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 TCHHQ07283 1943 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 A0A1B0GVT2 93 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PLA2G16P53816 162 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 CMC1Q7Z7K0 106 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PCDHB11Q9Y5F2 797 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 KCNU1A8MYU2 1149 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 HDAC3O15379 428 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 PRAMEF1O95521 474 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 RPLP0P05388 317 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 DLG4P78352 724 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 SHC3Q92529 594 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 KCNC2Q96PR1 638 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 DPYSL5Q9BPU6 564 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 USB1Q9BQ65 265 aaKnown RBP16.17■□□□□ 0.18
PTCH1-201ENST00000331920 ZNF451Q9Y4E5 1061 aa16.17■□□□□ 0.18
PTCH1-201ENST00000331920 UGGT1Q9NYU2 1555 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 A0A0U1RQK1 487 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 A0A1W2PRQ8 180 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GADD45GO95257 159 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 REP15Q6BDI9 236 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 ANKRD23Q86SG2 305 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 BOLLQ8N9W6 283 aaKnown RBP16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 CASTOR1Q8WTX7 329 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GDF3Q9NR23 364 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 BICRAQ9NZM4 1560 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 SHOXO15266 292 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 MTMR9Q96QG7 549 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 BEX2Q9BXY8 128 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 RGCCQ9H4X1 137 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 BEX1Q9HBH7 125 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 PHPT1Q9NRX4 125 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-201ENST00000331920 PRR5-ARHGAP8B1AHC4 643 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 B3GALT2O43825 422 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 MPZL2O60487 215 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 FXYD6P3P58550 94 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 ARHGAP8P85298 464 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 NIPAL4Q0D2K0 466 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TWIST2Q8WVJ9 160 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TM9SF2Q99805 663 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 HOPXQ9BPY8 73 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-201ENST00000331920 TBCCD1Q9NVR7 557 aa16.16■□□□□ 0.18
PTCH1-201ENST00000331920 GLRA2P23416 452 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms