RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PDPRQ8NCN5 879 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 RCN3Q96D15 328 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 NUS1Q96E22 293 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 HGH1Q9BTY7 390 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 AKTIPQ9H8T0 292 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 POLMQ9NP87 494 aaPredicted RBP22.18■■□□□ 1.14
CDX1-201ENST00000231656 SMOXQ9NWM0 555 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 KLHL42Q9P2K6 505 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 ZNF225Q9UK10 706 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 FZD4Q9ULV1 537 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 PTGDR2Q9Y5Y4 395 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 MUC3AQ02505 3323 aa22.18■■□□□ 1.14
CDX1-201ENST00000231656 ATP6AP2A0A1C7CYW4 349 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 FADS2P1A8MWK0 482 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 H0Y3Z8 333 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ATP6AP2O75787 350 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 KRT36O76013 467 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 PSMG1O95456 288 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ESRRBO95718 433 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 GNAZP19086 355 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 NUDT2P50583 147 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ATP4BP51164 291 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 DGKEP52429 567 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ACTR3P61158 418 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 PCBP2Q15366 365 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDX1-201ENST00000231656 ZNF765Q7L2R6 523 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 KBTBD6Q86V97 674 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 PHYKPLQ8IUZ5 450 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 KYQ8NBH2 561 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 OR56A4Q8NGH8 313 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 OR14C36Q8NHC7 312 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ESAMQ96AP7 390 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 TBC1D17Q9HA65 648 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 EBF2Q9HAK2 575 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 C2orf42Q9NWW7 574 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 NOP53Q9NZM5 478 aaKnown RBP22.17■■□□□ 1.14
CDX1-201ENST00000231656 ADAMTS6Q9UKP5 1117 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 OARD1Q9Y530 152 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 IGLON5A6NGN9 336 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 FFAR2O15552 330 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 ATG13O75143 517 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 GPC4O75487 556 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 PRDX3P30048 256 aaKnown RBP22.17■■□□□ 1.14
CDX1-201ENST00000231656 ADPRHP54922 357 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 TBL3Q12788 808 aaKnown RBP22.17■■□□□ 1.14
CDX1-201ENST00000231656 WLSQ5T9L3 541 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 C6orf163Q5TEZ5 329 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 CFAP61Q8NHU2 1237 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 HMGB4Q8WW32 186 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 NUSAP1Q9BXS6 441 aaKnown RBP22.17■■□□□ 1.14
CDX1-201ENST00000231656 FAM126AQ9BYI3 521 aaPredicted RBP22.17■■□□□ 1.14
CDX1-201ENST00000231656 CD93Q9NPY3 652 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 KCTD5Q9NXV2 234 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 NCKAP1Q9Y2A7 1128 aa22.17■■□□□ 1.14
CDX1-201ENST00000231656 RAD51BO15315 384 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 ALDOCP09972 364 aaKnown RBP22.16■■□□□ 1.14
CDX1-201ENST00000231656 CDC16Q13042 620 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 RBBP7Q16576 425 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 TTLL9Q3SXZ7 439 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 GK5Q6ZS86 529 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 DSELQ8IZU8 1212 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 ZNF382Q96SR6 550 aa22.16■■□□□ 1.14
CDX1-201ENST00000231656 PSMD12O00232 456 aaPredicted RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 ANP32DO95626 131 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 CBSLP0DN79 551 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 CBSP35520 551 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 TPMTP51580 245 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 DPTQ07507 201 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 SFSWAPQ12872 951 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 FASTKQ14296 549 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 RCN1Q15293 331 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 C18orf21Q32NC0 220 aaPredicted RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 C1orf146Q5VVC0 180 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 C16orf89Q6UX73 402 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 FAM124AQ86V42 546 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 ZFR2Q9UPR6 939 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 TNPO3Q9Y5L0 923 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 PDE5AO76074 875 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 S100BP04271 92 aaPredicted RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 UROSP10746 265 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 MTTPP55157 894 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 ZRSR2Q15696 482 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 GPRIN3Q6ZVF9 776 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 NLRP8Q86W28 1048 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 DDIASQ8IXT1 998 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 FBXW8Q8N3Y1 598 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 BTN2A2Q8WVV5 523 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 STMN2Q93045 179 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 VPS35Q96QK1 796 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 OSBPL6Q9BZF3 934 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 POLG2Q9UHN1 485 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 MBD1Q9UIS9 605 aaPredicted RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 PTBP2Q9UKA9 531 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 PRPF19Q9UMS4 504 aaKnown RBP22.15■■□□□ 1.14
CDX1-201ENST00000231656 BTRCQ9Y297 605 aa22.15■■□□□ 1.14
CDX1-201ENST00000231656 PRR23AA6NEV1 266 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 K7ESM1 405 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 STK25O00506 426 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 TAPBPO15533 448 aa22.14■■□□□ 1.13
CDX1-201ENST00000231656 CRCPO75575 148 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms