RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TRAP1Q12931 704 aaKnown RBP17.79■□□□□ 0.44
SMPD3-211ENST00000568373 LRRC36Q1X8D7 754 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 MBOAT1Q6ZNC8 495 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SPATA24Q86W54 205 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 C12orf76Q8N812 135 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-211ENST00000568373 HCAR2Q8TDS4 363 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SLC45A3Q96JT2 553 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 PCDHAC1Q9H158 963 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 TMEM45AQ9NWC5 275 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 ZIM2Q9NZV7 527 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 NFKBIL1Q9UBC1 381 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-211ENST00000568373 SLC27A6Q9Y2P4 619 aa17.79■□□□□ 0.44
SMPD3-211ENST00000568373 FXYD1O00168 92 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 TULP3O75386 442 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 SLC22A3O75751 556 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ANXA5P08758 320 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 MSH3P20585 1137 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 XPAP23025 273 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ZFP36L2P47974 494 aaKnown RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 RPIAP49247 311 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 KCNK10P57789 538 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 UFM1P61960 85 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 GPM6BQ13491 265 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 HENMT1Q5T8I9 393 aaKnown RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 TMC5Q6UXY8 1006 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 DPPA4Q7L190 304 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 MINDY1Q8N5J2 469 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ZNF366Q8N895 744 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 LRCH3Q96II8 777 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 HBEGFQ99075 208 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 HEBP1Q9NRV9 189 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 RAD18Q9NS91 495 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 GID8Q9NWU2 228 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ABCD2Q9UBJ2 740 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 C16orf96A6NNT2 1141 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 CFAP99D6REC4 459 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 LSM1O15116 133 aaKnown RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 MTX2O75431 263 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 C8GP07360 202 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ENO2P09104 434 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ST8SIA6P61647 398 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 BLMHQ13867 455 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ABRAXAS2Q15018 415 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 PLEKHS1Q5SXH7 462 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 IRGCQ6NXR0 463 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 UBE2R2Q712K3 238 aaPredicted RBP17.78■□□□□ 0.44
SMPD3-211ENST00000568373 PDSS2Q86YH6 399 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 TRAM1L1Q8N609 369 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ZSCAN5AQ9BUG6 496 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 NTMT1Q9BV86 223 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 IL1RL2Q9HB29 575 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 ARL15Q9NXU5 204 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 SUN2Q9UH99 717 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 PDE10AQ9Y233 779 aa17.78■□□□□ 0.44
SMPD3-211ENST00000568373 TRANK1O15050 2925 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 LIN7AO14910 233 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 TNRC18O15417 2968 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 PEX1O43933 1283 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 STK16O75716 305 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 C8BP07358 591 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 MPC1LP0DKB6 136 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 EPB42P16452 691 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 PIK3CGP48736 1102 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 CDKL1Q00532 357 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 EMX2Q04743 252 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 KLC1Q07866 573 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 FOXM1Q08050 763 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 BOP1Q14137 746 aaKnown RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 NR6A1Q15406 480 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 MAP7D1Q3KQU3 841 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 POM121L1PQ3SYA9 428 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 C6orf10Q5SRN2 563 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 OGFRL1Q5TC84 451 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 SERPINA13PQ6UXR4 307 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 ETFBKMTQ8IXQ9 262 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 ASB11Q8WXH4 323 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 LRRC58Q96CX6 371 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 RIOK2Q9BVS4 552 aaKnown RBP17.77■□□□□ 0.44
SMPD3-211ENST00000568373 PARVBQ9HBI1 364 aa17.77■□□□□ 0.44
SMPD3-211ENST00000568373 PRSS51A0A1B0GVH4 220 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 KPNA5O15131 536 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 AP2A2O94973 939 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 EBLN1P0CF75 366 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 GGT5P36269 586 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 MMP12P39900 470 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 POLR2JP52435 117 aaKnown RBP17.76■□□□□ 0.43
SMPD3-211ENST00000568373 CREB5Q02930 508 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 SFT2D3Q587I9 215 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TTC23LQ6PF05 361 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 RNF165Q6ZSG1 346 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TMEM126BQ8IUX1 230 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 VRK3Q8IV63 474 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 DDHD1Q8NEL9 900 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 SKA2Q8WVK7 121 aaPredicted RBP17.76■□□□□ 0.43
SMPD3-211ENST00000568373 VPS33AQ96AX1 596 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 SAMD11Q96NU1 681 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TRIM54Q9BYV2 358 aa17.76■□□□□ 0.43
SMPD3-211ENST00000568373 TRPS1Q9UHF7 1281 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms