RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 LHX9Q9NQ69 397 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 HOMER3Q9NSC5 361 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 SOHLH2Q9NX45 425 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 SIDT1Q9NXL6 827 aaKnown RBP6.36□□□□□ -1.39
FOXN3-205ENST00000553904 SMARCAL1Q9NZC9 954 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 IL17BQ9UHF5 180 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 SLC24A2Q9UI40 661 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 POLHQ9Y253 713 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 PCDHGA6Q9Y5G7 932 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 MRFAP1Q9Y605 127 aa6.36□□□□□ -1.39
FOXN3-205ENST00000553904 CFAP20Q9Y6A4 193 aaKnown RBP6.36□□□□□ -1.39
FOXN3-205ENST00000553904 LRRK1Q38SD2 2015 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 CFAP47Q6ZTR5 3102 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ANKRD36A6QL64 1941 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PKD1L2Q7Z442 2459 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 IGHV5-51A0A0C4DH38 117 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 TRBV5-4A0A0C4DH59 114 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 C2orf74A8MZ97 194 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 GAPDHSO14556 408 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 KPNA5O15131 536 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 KIF1CO43896 1103 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 KLHL41O60662 606 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SCRG1O75711 98 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FTCDO95954 541 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 RPN2P04844 631 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PRKAR1AP10644 381 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FOLR1P15328 257 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 TPH1P17752 444 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 POLR2CP19387 275 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 WT1P19544 449 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 AGXTP21549 392 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ADRA1DP25100 572 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 MSNP26038 577 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ZNF140P52738 457 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SH3BP2P78314 561 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PRAMEP78395 509 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SARNPP82979 210 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 KLF1Q13351 362 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 MSLNQ13421 630 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ERV3-1Q14264 604 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SPARCL1Q14515 664 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 RPS6KA1Q15418 735 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 DEFB109BQ30KR1 87 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FASTKD1Q53R41 847 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 AARS2Q5JTZ9 985 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 DENND5AQ6IQ26 1287 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 TTC23LQ6PF05 361 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FAM83HQ6ZRV2 1179 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SYVN1Q86TM6 617 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 AMIGO1Q86WK6 493 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 TBC1D21Q8IYX1 336 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 GPR135Q8IZ08 494 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 UNC5BQ8IZJ1 945 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SPC24Q8NBT2 197 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 GSDMBQ8TAX9 411 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SLC35B2Q8TB61 432 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 CPT1BQ92523 772 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PEX13Q92968 403 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SLC22A18Q96BI1 424 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 CLIP3Q96DZ5 547 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ABHD17AQ96GS6 310 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 HES6Q96HZ4 224 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FAM118BQ9BPY3 351 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 DPH2Q9BQC3 489 aaPredicted RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 TWSG1Q9GZX9 223 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FAM96AQ9H5X1 160 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 COG4Q9H9E3 785 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 LATS2Q9NRM7 1088 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 PAK5Q9P286 719 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 CROTQ9UKG9 612 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 RIMKLBQ9ULI2 386 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 GUCA1BQ9UMX6 200 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 FARSAQ9Y285 508 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ASF1AQ9Y294 204 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 DRG1Q9Y295 367 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ZKSCAN5Q9Y2L8 839 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 REXO2Q9Y3B8 237 aaKnown RBP6.35□□□□□ -1.39
FOXN3-205ENST00000553904 RP1P56715 2156 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SHROOM3Q8TF72 1996 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 LRP4O75096 1905 aa6.35□□□□□ -1.39
FOXN3-205ENST00000553904 SPEGQ15772 3267 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 FREM2Q5SZK8 3169 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 IGLV3-16A0A075B6K0 115 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 GSAPA4D1B5 854 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 MROH6A6NGR9 719 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 DDX3YO15523 660 aaKnown RBP6.34□□□□□ -1.39
FOXN3-205ENST00000553904 ARHGAP6O43182 974 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 METTL18O95568 372 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 IFNB1P01574 187 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 IGHEP01854 428 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 NTRK1P04629 796 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 RAB40ALP0C0E4 278 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 MSL3P1P0C860 447 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 EBLN1P0CF75 366 aa6.34□□□□□ -1.39
FOXN3-205ENST00000553904 CYP2A7P20853 494 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms