RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CSTF3Q12996 717 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FHL3Q13643 280 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 COTL1Q14019 142 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GCKRQ14397 625 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SPARCL1Q14515 664 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 KRT24Q2M2I5 525 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZACNQ401N2 412 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM76BQ5HYJ3 339 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ARMCX5Q6P1M9 558 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLBD1Q6P4A8 553 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 C16orf54Q6UWD8 224 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CROCCP2Q86T23 111 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC25Q86WR0 208 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF354CQ86Y25 554 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 PALB2Q86YC2 1186 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCDC117Q8IWD4 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 UNC45BQ8IWX7 931 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 LAS2Q8IYD9 372 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF34Q8IZ26 560 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ELMOD2Q8IZ81 293 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MREGQ8N565 214 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CSGALNACT2Q8N6G5 542 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ALLCQ8N6M5 410 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCNYL1Q8N7R7 359 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF565Q8N9K5 539 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 C7orf57Q8NEG2 295 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR52K1Q8NGK4 314 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR6S1Q8NH40 331 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 OR8K3Q8NH51 312 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CEP70Q8NHQ1 597 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 RFWD2Q8NHY2 731 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FBXO30Q8TB52 745 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FANK1Q8TC84 345 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MGARPQ8TDB4 240 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC2A14Q8TDB8 520 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GIPC3Q8TF64 312 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 AENQ8WTP8 325 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ASB12Q8WXK4 309 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 C18orf8Q96DM3 657 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 HMCESQ96FZ2 354 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 CNDP1Q96KN2 507 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 RUNDC3BQ96NL0 473 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 OPALINQ96PE5 141 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 FCRL5Q96RD9 977 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SIGLEC11Q96RL6 698 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TUBB6Q9BUF5 446 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ACAT2Q9BWD1 397 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 GON7Q9BXV9 100 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MROH8Q9H579 483 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRRC19Q9H756 370 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM206Q9H813 350 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SFXN1Q9H9B4 322 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MRM3Q9HC36 420 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 KCNK9Q9NPC2 374 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MRPL40Q9NQ50 206 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZC4H2Q9NQZ6 224 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 IARS2Q9NSE4 1012 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 LIN7CQ9NUP9 197 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 PANK4Q9NVE7 773 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 DDX18Q9NVP1 670 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TRNAU1APQ9NX07 287 aaKnown RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ADAM22Q9P0K1 906 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF624Q9P2J8 865 aaPredicted RBP4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SNX7Q9UNH6 387 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 STK38LQ9Y2H1 464 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 AP3M1Q9Y2T2 418 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 ABCC4O15439 1325 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 SHPRHQ149N8 1683 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 LMO7Q8WWI1 1683 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 TNS2Q63HR2 1409 aa4.63□□□□□ -1.67
HMGB3P13-201ENST00000511263 MEGF6O75095 1541 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 FAM237AA0A1B0GTK4 181 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 A6NCN8 305 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 GRM8O00222 908 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 NKX2-8O15522 239 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRPF4O43172 522 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC7A4O43246 635 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SSX5O60225 188 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ECE2O60344 883 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PALMO75781 387 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PLEKHA8P1O95397 391 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CHRNA1P02708 482 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC4A1P02730 911 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ATP5BP06576 529 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 LYNP07948 512 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 UBTFL1P0CB47 393 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TPBGLP0DKB5 382 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 KRT3P12035 628 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CSF2RAP15509 400 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 PDGFRAP16234 1089 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ITGA2P17301 1181 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 TM4SF1P30408 202 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 AKT1P31749 480 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SOX6P35712 828 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CRKLP46109 303 aaKnown RBP4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 P2RX3P56373 397 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 XIAPP98170 497 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF91Q05481 1191 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 SPAG1Q07617 926 aa4.62□□□□□ -1.67
HMGB3P13-201ENST00000511263 CDC20Q12834 499 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms