RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 RECQL5O94762 991 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 TRIM16O95361 564 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 G6PDP11413 515 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 RHOQP17081 205 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 MAGEA2P43356 314 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 MASP1P48740 699 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 SCNN1GP51170 649 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 ITKQ08881 620 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 SF3B4Q15427 424 aaKnown RBP eCLIP17.47■□□□□ 0.392e-6■■□□□ 13.6
NUP54-205ENST00000507257 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 VARS2Q5ST30 1063 aaKnown RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 TMEM236Q5W0B7 351 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 IL31Q6EBC2 164 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 ZNF467Q7Z7K2 595 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 TMEM179BQ7Z7N9 219 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 GLB1L3Q8NCI6 653 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 IPCEF1Q8WWN9 437 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 ZNF486Q96H40 463 aaPredicted RBP17.47■□□□□ 0.39
NUP54-205ENST00000507257 ACOT13Q9NPJ3 140 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 TMEM248Q9NWD8 314 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 VPS51Q9UID3 782 aa17.47■□□□□ 0.39
NUP54-205ENST00000507257 PTPRDP23468 1912 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 LTBP3Q9NS15 1303 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 ILVBLA1L0T0 632 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 FAM220BPB1ANY3 271 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 ASNA1O43681 348 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 DFNA5O60443 496 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 OR4F21O95013 312 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 FKBP9O95302 570 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 AGTR2P50052 363 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 FCGRTP55899 365 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 MAXP61244 160 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 IFITM2Q01629 132 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 DALRD3Q5D0E6 543 aaKnown RBP17.46■□□□□ 0.39
NUP54-205ENST00000507257 CATSPEREQ5SY80 951 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 ATG9BQ674R7 924 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PRR23CQ6ZRP0 262 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PAGE2Q7Z2X7 111 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 C14orf80Q86SX3 495 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PLPP6Q8IY26 295 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 MICU2Q8IYU8 434 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 ZNF683Q8IZ20 524 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 CNIH3Q8TBE1 160 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 FRS2Q8WU20 508 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 GTF2H4Q92759 462 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 FAM162AQ96A26 154 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 HMCESQ96FZ2 354 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 NXF2Q9GZY0 626 aaKnown RBP17.46■□□□□ 0.39
NUP54-205ENST00000507257 SIAEQ9HAT2 523 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PRDM5Q9NQX1 630 aaPredicted RBP17.46■□□□□ 0.39
NUP54-205ENST00000507257 MPP6Q9NZW5 540 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 GALPQ9UBC7 116 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PCDHB14Q9Y5E9 798 aa17.46■□□□□ 0.39
NUP54-205ENST00000507257 PABPN1LA6NDY0 278 aaKnown RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 CDC7O00311 574 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 SNPHO15079 494 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 RGS10O43665 173 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 EFNA1P20827 205 aaPredicted RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 AKT1P31749 480 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 TGFBR2P37173 567 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 NCS1P62166 190 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 PON2Q15165 354 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 UBE2UQ5VVX9 321 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 LRRC8DQ7L1W4 858 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 DPP9Q86TI2 863 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 PLD3Q8IV08 490 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 CARNMT1Q8N4J0 409 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 MCFD2Q8NI22 146 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 FCGR1BQ92637 280 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 APOL4Q9BPW4 351 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 CLSTN3Q9BQT9 956 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ACBD6Q9BR61 282 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 SP110Q9HB58 689 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 NPAP1Q9NZP6 1156 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 VPS9D1Q9Y2B5 631 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 GOLGB1Q14789 3259 aaKnown RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 METTL15A6NJ78 407 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 J3KR12 359 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 IGFBP6P24592 240 aaPredicted RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 IGFBP5P24593 272 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 PBX3P40426 434 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ERVPABLB-1P60509 514 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 CSNK2BP67870 215 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ZNF45Q02386 682 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ZNF404Q494X3 552 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 DUSP28Q4G0W2 176 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 RUNDC3AQ59EK9 446 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ANKRD34AQ69YU3 496 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 SCIMPQ6UWF3 145 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 DET1Q7L5Y6 550 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 NANOGNBQ7Z5D8 188 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 CALHM3Q86XJ0 350 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 HOMEZQ8IX15 550 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 OR10A6Q8NH74 314 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 PSMA8Q8TAA3 256 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 CDKN2AIPNLQ96HQ2 116 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 PPP3R2Q96LZ3 170 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms